RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 AMHP03971 560 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 CTSHP09668 335 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 SKIP12755 728 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 IBSPP21815 317 aaPredicted RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 COMTP21964 271 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 AKAP5P24588 427 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 TNNT3P45378 269 aaPredicted RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 ASPAP45381 313 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 RAP1GAPP47736 663 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 CLCN6P51797 869 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 CDH8P55286 799 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 RWDD2BP57060 319 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 PAK2Q13177 524 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 TRIM71Q2Q1W2 868 aaKnown RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 SV2CQ496J9 727 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 FAM43BQ6ZT52 329 aaPredicted RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 ZNF572Q7Z3I7 529 aaPredicted RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 RPAINQ86UA6 219 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 KLHL7Q8IXQ5 586 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 LRRC52Q8N7C0 313 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 USP38Q8NB14 1042 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 NOA1Q8NC60 698 aaKnown RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 OR6B3Q8NGW1 331 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 FEZF2Q8TBJ5 459 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 HES6Q96HZ4 224 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 BCO2Q9BYV7 579 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 XYLT2Q9H1B5 865 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 LHX5Q9H2C1 402 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 GOLPH3Q9H4A6 298 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 NXF3Q9H4D5 531 aaKnown RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 KLK14Q9P0G3 267 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 CNTN3Q9P232 1028 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 WDR35Q9P2L0 1181 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 HESX1Q9UBX0 185 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 IP6K2Q9UHH9 426 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 SIX4Q9UIU6 781 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 BARX2Q9UMQ3 279 aaPredicted RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 PCDHGC3Q9UN70 934 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 ST3GAL5Q9UNP4 418 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 NOC2LQ9Y3T9 749 aaKnown RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 IPPQ9Y573 584 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 SNX9Q9Y5X1 595 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 GRXCR1A8MXD5 290 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 PDE2AO00408 941 aaPredicted RBP9.83□□□□□ -0.84
SS18-220ENST00000582092 RRP9O43818 475 aaKnown RBP9.83□□□□□ -0.84
SS18-220ENST00000582092 TLL1O43897 1013 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 NBNO60934 754 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 FOSL2P15408 326 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 H2AFXP16104 143 aaPredicted RBP9.83□□□□□ -0.84
SS18-220ENST00000582092 CYP3A5P20815 502 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 RRM1P23921 792 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 RAB27AP51159 221 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 GUCY2FP51841 1108 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 ZNF132P52740 706 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 SLC8A3P57103 927 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 NOMO3P69849 1222 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 GLRA4Q5JXX5 417 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 PPP2R2DQ66LE6 453 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 HDXQ7Z353 690 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 MAATS1Q7Z4T9 603 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 PHLDB2Q86SQ0 1253 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 FAM228AQ86W67 206 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 UBR7Q8N806 425 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 APPL2Q8NEU8 664 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 PGBD4Q96DM1 585 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 C18orf8Q96DM3 657 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 RUNDC3BQ96NL0 473 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 KRT12Q99456 494 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 CDX2Q99626 313 aaPredicted RBP9.83□□□□□ -0.84
SS18-220ENST00000582092 CARD9Q9H257 536 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 EPC1Q9H2F5 836 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 SMYD3Q9H7B4 428 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 ANKZF1Q9H8Y5 726 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 ABCB6Q9NP58 842 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 RASAL2Q9UJF2 1139 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 COG5Q9UP83 839 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 USTQ9Y2C2 406 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 HES2Q9Y543 173 aa9.83□□□□□ -0.84
SS18-220ENST00000582092 SMIM28A0A1B0GU29 152 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 M0QYV0 167 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 CILPO75339 1184 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 FGGP02679 453 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 KCNE1P15382 129 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 CTNNA2P26232 953 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 GNL1P36915 607 aaPredicted RBP9.82□□□□□ -0.84
SS18-220ENST00000582092 TAF6P49848 677 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 NDST1P52848 882 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 RAD23BP54727 409 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 WDR5P61964 334 aaKnown RBP9.82□□□□□ -0.84
SS18-220ENST00000582092 PIGHQ14442 188 aaPredicted RBP9.82□□□□□ -0.84
SS18-220ENST00000582092 HIC1Q14526 733 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 CNGA2Q16280 664 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 PLEKHG4Q58EX7 1191 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 FAM26DQ5JW98 314 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 FBXO47Q5MNV8 452 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 C9orf57Q5W0N0 161 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 WDR93Q6P2C0 686 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 MON1BQ7L1V2 547 aa9.82□□□□□ -0.84
SS18-220ENST00000582092 UNC93AQ86WB7 457 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms