RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 SLC39A12Q504Y0 691 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 SMYD5Q6GMV2 418 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 IQCEQ6IPM2 695 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 B3GALNT2Q8NCR0 500 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 NT5C1AQ9BXI3 368 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 IFNKQ9P0W0 207 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 DNAJC12Q9UKB3 198 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 GTF3C4Q9UKN8 822 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 CNTN6Q9UQ52 1028 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 FHOD1Q9Y613 1164 aa16.1■□□□□ 0.17
MKS1-210ENST00000581180 RNF225M0QZC1 329 aaPredicted RBP16.09■□□□□ 0.17
MKS1-210ENST00000581180 EPHB6O15197 1021 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 AP5Z1O43299 807 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 SEC24AO95486 1093 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 SPATA31D3P0C874 917 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 UCHL3P15374 230 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 RFX1P22670 979 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 LTBRP36941 435 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 ZNF132P52740 706 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 RAD23BP54727 409 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 MFAP3P55082 362 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 ADCY1Q08828 1119 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 ORC1Q13415 861 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 CCDC85BQ15834 202 aaPredicted RBP16.09■□□□□ 0.17
MKS1-210ENST00000581180 PTPN21Q16825 1174 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 LLGL2Q6P1M3 1020 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 SPATA31D4Q6ZUB0 917 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 ACOT1Q86TX2 421 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 SLC4A11Q8NBS3 891 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 KREMEN2Q8NCW0 462 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 MYCBPAPQ8TBZ2 947 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 C2orf15Q8WU43 125 aaKnown RBP16.09■□□□□ 0.17
MKS1-210ENST00000581180 HDAC7Q8WUI4 952 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 SHC3Q92529 594 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 CASP10Q92851 521 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 PABPC5Q96DU9 382 aaKnown RBP16.09■□□□□ 0.17
MKS1-210ENST00000581180 TNIP3Q96KP6 325 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 PGLYRP2Q96PD5 576 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 XPO4Q9C0E2 1151 aaKnown RBP16.09■□□□□ 0.17
MKS1-210ENST00000581180 GPR88Q9GZN0 384 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 CRISPLD1Q9H336 500 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 MAFFQ9ULX9 164 aa16.09■□□□□ 0.17
MKS1-210ENST00000581180 PATJQ8NI35 1801 aa16.08■□□□□ 0.17
MKS1-210ENST00000581180 DENND4CQ5VZ89 1909 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 SPTBN5Q9NRC6 3674 aaKnown RBP16.08■□□□□ 0.16
MKS1-210ENST00000581180 PAPLNO95428 1278 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 MAPRE1Q15691 268 aaKnown RBP16.08■□□□□ 0.16
MKS1-210ENST00000581180 NFE2Q16621 373 aaPredicted RBP16.08■□□□□ 0.16
MKS1-210ENST00000581180 ZNF394Q53GI3 561 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 MDH1BQ5I0G3 518 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 SARM1Q6SZW1 724 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 TMEM270Q6UE05 265 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 TCEAL8Q8IYN2 117 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 ATAD1Q8NBU5 361 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 SPPL2BQ8TCT7 592 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 MYLPFQ96A32 169 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 PCED1BQ96HM7 432 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 TMEM176AQ96HP8 235 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 PLEKHA4Q9H4M7 779 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 MAN1C1Q9NR34 630 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 FAM207AQ9NSI2 230 aaPredicted RBP16.08■□□□□ 0.16
MKS1-210ENST00000581180 CLEC1BQ9P126 229 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 HSFX1Q9UBD0 423 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 DAAM1Q9Y4D1 1078 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 PCDHB4Q9Y5E5 795 aa16.08■□□□□ 0.16
MKS1-210ENST00000581180 EYSQ5T1H1 3165 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.07■□□□□ 0.16
MKS1-210ENST00000581180 TBX10O75333 385 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 DLX2Q07687 328 aaPredicted RBP16.07■□□□□ 0.16
MKS1-210ENST00000581180 ARHGAP44Q17R89 818 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 UVSSAQ2YD98 709 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 PAQR9Q6ZVX9 377 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 TTC9BQ8N6N2 239 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 C12orf29Q8N999 325 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 NEK11Q8NG66 645 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 FUBP3Q96I24 572 aaKnown RBP eCLIP16.07■□□□□ 0.16
MKS1-210ENST00000581180 B3GNT5Q9BYG0 378 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 STK33Q9BYT3 514 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 ABCB6Q9NP58 842 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 CLDND1Q9NY35 253 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 PCDHB5Q9Y5E4 795 aa16.07■□□□□ 0.16
MKS1-210ENST00000581180 FOXN3O00409 490 aaPredicted RBP16.06■□□□□ 0.16
MKS1-210ENST00000581180 ZMYND10O75800 440 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 C8AP07357 584 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 PAEPP09466 180 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 HAPLN1P10915 354 aaPredicted RBP16.06■□□□□ 0.16
MKS1-210ENST00000581180 CDR1P51861 262 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 JAM2P57087 298 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 POLR2FP61218 127 aaKnown RBP16.06■□□□□ 0.16
MKS1-210ENST00000581180 DUSP4Q13115 394 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 DRAP1Q14919 205 aaPredicted RBP16.06■□□□□ 0.16
MKS1-210ENST00000581180 ANKRD54Q6NXT1 300 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 SYCE2Q6PIF2 218 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 C4orf50Q6ZRC1 276 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 RTL10Q7L3V2 364 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 FUKQ8N0W3 1084 aa16.06■□□□□ 0.16
MKS1-210ENST00000581180 RBBP8NLQ8NC74 664 aaPredicted RBP16.06■□□□□ 0.16
MKS1-210ENST00000581180 MAFAQ8NHW3 353 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms