RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 DPYDQ12882 1025 aa18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 SNW1Q13573 536 aaKnown RBP18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 FAM171BQ6P995 826 aa18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 USP34Q70CQ2 3546 aa18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 MFSD6LQ8IWD5 586 aa18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 FSIP1Q8NA03 581 aa18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 ZNF516Q92618 1163 aa18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 LPIN3Q9BQK8 851 aa18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 ABI2Q9NYB9 513 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 SIT1Q9Y3P8 196 aa18.19■□□□□ 0.5
CDC42EP4-206ENST00000581014 TCHHQ07283 1943 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 STK25O00506 426 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 TACC1O75410 805 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 ZNF202O95125 648 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 KIF20AO95235 890 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 HMGA1P17096 107 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 WARSP23381 471 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 GABRR2P28476 465 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 ATICP31939 592 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 MLLT6P55198 1093 aaPredicted RBP18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 FCHO2Q0JRZ9 810 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 KCNB1Q14721 858 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 VITQ6UXI7 678 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 PJA1Q8NG27 643 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 PARD3BQ8TEW8 1205 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 IRF7Q92985 503 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 NELL2Q99435 816 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 XYLT2Q9H1B5 865 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 ATXN3LQ9H3M9 355 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 GOLPH3LQ9H4A5 285 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 VRTNQ9H8Y1 702 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 OBP2AQ9NY56 170 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 GTF3C4Q9UKN8 822 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 CDH9Q9ULB4 789 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 TRAF3IP3Q9Y228 551 aa18.18■□□□□ 0.5
CDC42EP4-206ENST00000581014 PROB1E7EW31 1015 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 RFX1P22670 979 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 ACAT1P24752 427 aaKnown RBP18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 VIPR2P41587 438 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 MAGEA11P43364 429 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 RPL10AP62906 217 aaKnown RBP18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 MAPRE1Q15691 268 aaKnown RBP18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 NFIL3Q16649 462 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 ARHGAP15Q53QZ3 475 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 FAM200AQ8TCP9 573 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 PLEKHO2Q8TD55 490 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 CCDC47Q96A33 483 aaKnown RBP18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 MYRFLQ96LU7 910 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 CEP295NLQ96MC4 621 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 SLITRK6Q9H5Y7 841 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 TASP1Q9H6P5 420 aa18.17■□□□□ 0.5
CDC42EP4-206ENST00000581014 PATJQ8NI35 1801 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 COL4A3Q01955 1670 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 MYBPHLA2RUH7 354 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 SHISA7A6NL88 538 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 HEPACAM2A8MVW5 462 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 ARNTLO00327 626 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 MAPK13O15264 365 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 PRR29P0C7W0 189 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 CSH1P0DML2 217 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 CSH2P0DML3 217 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 GLULP15104 373 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 NBL1P41271 181 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 MAGEA9P43362 315 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 STXBP5Q5T5C0 1151 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 TMEM150AQ86TG1 271 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 ARID3BQ8IVW6 561 aaPredicted RBP18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 GUF1Q8N442 669 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 TRMT2BQ96GJ1 504 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 CCDC34Q96HJ3 373 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 PI4K2AQ9BTU6 479 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 FOXQ1Q9C009 403 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 BRD9Q9H8M2 597 aa18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 RIF1Q5UIP0 2472 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-206ENST00000581014 MYO15AQ9UKN7 3530 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 DMDP11532 3685 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 IKBKBO14920 756 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 CHADO15335 359 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 GFRA3O60609 400 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 NOL4O94818 638 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 F11P03951 625 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 C4BPAP04003 597 aaKnown RBP18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 NR3C1P04150 777 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 CYP2F1P24903 491 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 LMO2P25791 158 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 DDX6P26196 483 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■■■■□ 26.7
CDC42EP4-206ENST00000581014 MCCD1P59942 119 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 ENPEPQ07075 957 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 TRPC3Q13507 836 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 GRM2Q14416 872 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 TAF12Q16514 161 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 WDR72Q3MJ13 1102 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 GPR158Q5T848 1215 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 VSTM1Q6UX27 236 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 ZNF852Q6ZMS4 543 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 C4orf50Q6ZRC1 276 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 SPATA2LQ8IUW3 424 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 TMC2Q8TDI7 906 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 GIPC2Q8TF65 315 aa18.15■□□□□ 0.5
CDC42EP4-206ENST00000581014 SYAP1Q96A49 352 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms