RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 HOXD13P35453 343 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 VIPR2P41587 438 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 MAGEA11P43364 429 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 MAPRE1Q15691 268 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 MGAT5BQ3V5L5 792 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 INTS6LQ5JSJ4 861 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 FAM26FQ5R3K3 315 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 FAM171BQ6P995 826 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 UNC13DQ70J99 1090 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 YAF2Q8IY57 180 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 CSGALNACT2Q8N6G5 542 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 TTC9BQ8N6N2 239 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 GPR161Q8N6U8 529 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 CELF5Q8N6W0 485 aaKnown RBP15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 SUMF1Q8NBK3 374 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 ST13P5Q8NFI4 369 aaPredicted RBP15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 CSGALNACT1Q8TDX6 532 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 FAM3CQ92520 227 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 SAAL1Q96ER3 474 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 PANK2Q9BZ23 570 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 IKZF4Q9H2S9 585 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 ATXN3LQ9H3M9 355 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 PDE11AQ9HCR9 933 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 SIX4Q9UIU6 781 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 L1RE1Q9UN81 338 aa15.58■□□□□ 0.08
SMARCE1-216ENST00000580419 LRRN2O75325 713 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 NOL4O94818 638 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 PRPF6O94906 941 aaKnown RBP15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 F13A1P00488 732 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 F11P03951 625 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 TMEM191BP0C7N4 346 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 CHRNB1P11230 501 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 CCR3P51677 355 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 WNT7BP56706 349 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 LRRC32Q14392 662 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 GRM2Q14416 872 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 DGKKQ5KSL6 1271 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 GPR158Q5T848 1215 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 RESP18Q5W5W9 173 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 VSTM1Q6UX27 236 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 HSCBQ8IWL3 235 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 CMTM8Q8IZV2 173 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 GOLGA5Q8TBA6 731 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 BPIFB1Q8TDL5 484 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 RUBCNQ92622 972 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 SEPT5Q99719 369 aaPredicted RBP15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 FGFBP2Q9BYJ0 223 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 EPC1Q9H2F5 836 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 THG1LQ9NWX6 298 aaKnown RBP15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 HSPBP1Q9NZL4 362 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 USP25Q9UHP3 1055 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 RCOR1Q9UKL0 485 aa15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 R3HCC1Q9Y3T6 440 aaKnown RBP15.57■□□□□ 0.08
SMARCE1-216ENST00000580419 DPYSL4O14531 572 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 TGFB1I1O43294 461 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 TNNC2P02585 160 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 TDGF1P13385 188 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 GJA1P17302 382 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 CD72P21854 359 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 NLRP12P59046 1061 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 ASIC1P78348 528 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 PSMD6Q15008 389 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 SOWAHAQ2M3V2 549 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 C4orf50Q6ZRC1 276 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 HS2ST1Q7LGA3 356 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 ERMP1Q7Z2K6 904 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 TMEM150AQ86TG1 271 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 MON1AQ86VX9 555 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 SPEM1Q8N4L4 309 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 ATRIPQ8WXE1 791 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 RSPRY1Q96DX4 576 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 SPATA17Q96L03 361 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 MTMR12Q9C0I1 747 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 AGPAT3Q9NRZ7 376 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 DDX43Q9NXZ2 648 aaKnown RBP15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 FAM13BQ9NYF5 915 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 EHD2Q9NZN4 543 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 TFIP11Q9UBB9 837 aaKnown RBP15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 CDH9Q9ULB4 789 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 NCANO14594 1321 aa15.56■□□□□ 0.08
SMARCE1-216ENST00000580419 COL4A3Q01955 1670 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 POLR2DO15514 142 aaKnown RBP15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 TACC1O75410 805 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 TCF3P15923 654 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 CTHP32929 405 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 AP3M2P53677 418 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 CLDN10P78369 228 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 AMPD2Q01433 879 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 MTAPQ13126 283 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 TAF12Q16514 161 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 SNRNP35Q16560 246 aaKnown RBP15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 ADGRF2Q8IZF7 708 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 XXYLT1Q8NBI6 393 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 ZSWIM2Q8NEG5 633 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 FAM200AQ8TCP9 573 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 SCFD1Q8WVM8 642 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 DHX58Q96C10 678 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 HPDLQ96IR7 371 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 LPIN3Q9BQK8 851 aa15.55■□□□□ 0.08
SMARCE1-216ENST00000580419 FAM83CQ9BQN1 747 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms