RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 USP33Q8TEY7 942 aa17.06■□□□□ 0.32
IFT20-209ENST00000579419 CNOT6LQ96LI5 555 aaKnown RBP17.06■□□□□ 0.32
IFT20-209ENST00000579419 MBD1Q9UIS9 605 aaPredicted RBP17.06■□□□□ 0.32
IFT20-209ENST00000579419 FLNBO75369 2602 aaKnown RBP17.06■□□□□ 0.32
IFT20-209ENST00000579419 CITO14578 2027 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 NUP205Q92621 2012 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 TADA3O75528 432 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 HAPLN1P10915 354 aaPredicted RBP17.05■□□□□ 0.32
IFT20-209ENST00000579419 ODC1P11926 461 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 MUTP22033 750 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 LILRA4P59901 499 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 LMAN2Q12907 356 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 SEMA3BQ13214 749 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 C2orf27AQ580R0 203 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 SDHAF4Q5VUM1 108 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 C11orf74Q86VG3 221 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 TMEFF1Q8IYR6 380 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 CPA6Q8N4T0 437 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 CCDC33Q8N5R6 958 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 BBC3Q96PG8 261 aaPredicted RBP17.05■□□□□ 0.32
IFT20-209ENST00000579419 KIF9Q9HAQ2 790 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 PLEKHA5Q9HAU0 1116 aa17.05■□□□□ 0.32
IFT20-209ENST00000579419 DUS2Q9NX74 493 aaKnown RBP17.05■□□□□ 0.32
IFT20-209ENST00000579419 ABI2Q9NYB9 513 aaPredicted RBP17.05■□□□□ 0.32
IFT20-209ENST00000579419 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
IFT20-209ENST00000579419 FAM221BA6H8Z2 402 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 K7EQS6 105 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 CLTAP09496 248 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 MATR3P43243 847 aaKnown RBP eCLIP17.04■□□□□ 0.32
IFT20-209ENST00000579419 SCAPQ12770 1279 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 ZNF77Q15935 545 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 RINT1Q6NUQ1 792 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 KCNK18Q7Z418 384 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 MON1AQ86VX9 555 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 TMEM161BQ8NDZ6 487 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
IFT20-209ENST00000579419 OLIG1Q8TAK6 271 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 OSCP1Q8WVF1 389 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 FNBP1Q96RU3 617 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 SLC22A12Q96S37 553 aa17.04■□□□□ 0.32
IFT20-209ENST00000579419 NUSAP1Q9BXS6 441 aaKnown RBP17.04■□□□□ 0.32
IFT20-209ENST00000579419 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
IFT20-209ENST00000579419 MAGED2Q9UNF1 606 aaPredicted RBP17.04■□□□□ 0.32
IFT20-209ENST00000579419 CLDN3O15551 220 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 DDX6P26196 483 aaKnown RBP eCLIP17.03■□□□□ 0.32
IFT20-209ENST00000579419 PPP2R3AQ06190 1150 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 RAD51AP2Q09MP3 1159 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 STRN3Q13033 797 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 NBR1Q14596 966 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 ENOX2Q16206 610 aaKnown RBP17.03■□□□□ 0.32
IFT20-209ENST00000579419 EML3Q32P44 896 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 SPATA1Q5VX52 437 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 TMEM92Q6UXU6 159 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 C1orf186Q6ZWK4 172 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 CENPQQ7L2Z9 268 aaPredicted RBP17.03■□□□□ 0.32
IFT20-209ENST00000579419 SFTPA1Q8IWL2 248 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 OR2I1PQ8NGU4 316 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 SNX29Q8TEQ0 813 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 DRC1Q96MC2 740 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 CYP2S1Q96SQ9 504 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 LINC00597Q9H2U6 94 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 TMLHEQ9NVH6 421 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 ADAMTS20P59510 1910 aa17.03■□□□□ 0.32
IFT20-209ENST00000579419 THADAQ6YHU6 1953 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 PP2D1A8MPX8 630 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 SEC24BO95487 1268 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 CYP11A1P05108 521 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 MAPTP10636 758 aaKnown RBP17.02■□□□□ 0.32
IFT20-209ENST00000579419 P2RY2P41231 377 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 IFNAR2P48551 515 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
IFT20-209ENST00000579419 USP4Q13107 963 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 ZNF268Q14587 947 aaPredicted RBP17.02■□□□□ 0.32
IFT20-209ENST00000579419 CRY1Q16526 586 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 ME3Q16798 604 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 C9orf57Q5W0N0 161 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 JADE1Q6IE81 842 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 ZPBP2Q6X784 338 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 LPCAT2Q7L5N7 544 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 MRPS31Q92665 395 aaKnown RBP17.02■□□□□ 0.32
IFT20-209ENST00000579419 GTPBP2Q9BX10 602 aaKnown RBP17.02■□□□□ 0.32
IFT20-209ENST00000579419 TRPC7Q9HCX4 862 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 ZMYM5Q9UJ78 669 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 MMP17Q9ULZ9 603 aa17.02■□□□□ 0.32
IFT20-209ENST00000579419 TSC2P49815 1807 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 PCNX2A6NKB5 2137 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 TNFRSF10BO14763 440 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 FAM189A1O60320 539 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 NFICP08651 508 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 OPRD1P41143 372 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 ZC2HC1CQ53FD0 456 aaPredicted RBP17.01■□□□□ 0.31
IFT20-209ENST00000579419 SLC23A3Q6PIS1 610 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 RAB44Q7Z6P3 723 aaPredicted RBP17.01■□□□□ 0.31
IFT20-209ENST00000579419 SYT12Q8IV01 421 aa17.01■□□□□ 0.31
IFT20-209ENST00000579419 EFCAB13Q8IY85 973 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms