RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 IQCKQ8N0W5 287 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 PRELID2Q8N945 189 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 SDCCAG3Q96C92 435 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 TRIM33Q9UPN9 1127 aa12.58□□□□□ -0.39
ERBB2-206ENST00000578373 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 F8VP50 259 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 ADCY3O60266 1144 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-206ENST00000578373 SKOR1P84550 965 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 TNFAIP2Q03169 654 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 CENPCQ03188 943 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 DGKZQ13574 1117 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 ZNF606Q8WXB4 792 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 GMCL1Q96IK5 515 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 SPON2Q9BUD6 331 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 UPF3AQ9H1J1 476 aaKnown RBP12.58□□□□□ -0.4
ERBB2-206ENST00000578373 CISHQ9NSE2 258 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 NR2E1Q9Y466 385 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 GTPBP10A4D1E9 387 aaKnown RBP12.58□□□□□ -0.4
ERBB2-206ENST00000578373 PYGBP11216 843 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 PHEXP78562 749 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 ACOT1Q86TX2 421 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 EPS8L1Q8TE68 723 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 HPDLQ96IR7 371 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 GGA3Q9NZ52 723 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 NINJ2Q9NZG7 142 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 PPP1R11O60927 126 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-206ENST00000578373 ATP6V1G2O95670 118 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 LRRC23Q53EV4 343 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-206ENST00000578373 HGSNATQ68CP4 663 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 ZNF772Q68DY9 489 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-206ENST00000578373 C1orf186Q6ZWK4 172 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 ZNF384Q8TF68 577 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 ZNF669Q96BR6 464 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-206ENST00000578373 NSL1Q96IY1 281 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 MMP19Q99542 508 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 KRT82Q9NSB4 513 aa12.58□□□□□ -0.4
ERBB2-206ENST00000578373 UBA6A0AVT1 1052 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-206ENST00000578373 BANF1O75531 89 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 CTSHP09668 335 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 ATP6V1B1P15313 513 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 KCNJ2P63252 427 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 TAP1Q03518 808 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 DDR1Q08345 913 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 TRAPPC12Q8WVT3 735 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 FAM136AQ96C01 138 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 WDR18Q9BV38 432 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 MYOZ2Q9NPC6 264 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 AURKCQ9UQB9 309 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 FANCGO15287 622 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 GMPSP49915 693 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-206ENST00000578373 ALDH5A1P51649 535 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-206ENST00000578373 CLEC16AQ2KHT3 1053 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 TFDP3Q5H9I0 405 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 KLC3Q6P597 504 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 ZCWPW1Q9H0M4 648 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 SLCO1B3Q9NPD5 702 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 WHRNQ9P202 907 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 PNMA3Q9UL41 463 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 KIAA0391O15091 583 aaKnown RBP12.57□□□□□ -0.4
ERBB2-206ENST00000578373 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.41e-6■■■□□ 14.7
ERBB2-206ENST00000578373 SPATA31C1P0DKV0 1188 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 EPHB2P29323 1055 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 SULT1E1P49888 294 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 PCSK7Q16549 785 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 NBPF12Q5TAG4 269 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-206ENST00000578373 PPP1R13LQ8WUF5 828 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 TIPINQ9BVW5 301 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 NT5C1AQ9BXI3 368 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 DCLK3Q9C098 648 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 NEUROG2Q9H2A3 272 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
ERBB2-206ENST00000578373 SPDYE2BA6NHP3 402 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 AGPSO00116 658 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 TGFB1I1O43294 461 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 SPDYE6P0CI01 402 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 ADRA1DP25100 572 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 RBP5P82980 135 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 SATB1Q01826 763 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 USP10Q14694 798 aaKnown RBP12.56□□□□□ -0.4
ERBB2-206ENST00000578373 ZBTB41Q5SVQ8 909 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 SPOCD1Q6ZMY3 1216 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 KCTD10Q9H3F6 313 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 YY1AP1Q9H869 796 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 RSAD1Q9HA92 442 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 IL1RL2Q9HB29 575 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 KCNMB3Q9NPA1 279 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 WARS2Q9UGM6 360 aaKnown RBP12.56□□□□□ -0.4
ERBB2-206ENST00000578373 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 DYNC1LI2O43237 492 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-206ENST00000578373 TPST1O60507 370 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 NOL4O94818 638 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 MT-CO1P00395 513 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 DPEP1P16444 411 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 GLRBP48167 497 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 FAM182AQ5T1J6 154 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 FAM131BQ86XD5 332 aa12.56□□□□□ -0.4
ERBB2-206ENST00000578373 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms