RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ACBD6Q9BR61 282 aa17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PI4K2AQ9BTU6 479 aa17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SLC46A2Q9BY10 475 aa17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TRIM9Q9C026 710 aa17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SMG9Q9H0W8 520 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CUEDC2Q9H467 287 aa17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 GDAP2Q9NXN4 497 aa17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 DDX43Q9NXZ2 648 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 GTSE1Q9NYZ3 720 aa17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TFIP11Q9UBB9 837 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SMG5Q9UPR3 1016 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PTPRJQ12913 1337 aa17.89■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SPECC1L-ADORA2AF8WAN1 911 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 YEATS4O95619 227 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 KRT19P08727 400 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TMEM191BP0C7N4 346 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ACAT1P24752 427 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 HOXD13P35453 343 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 GPR15P49685 360 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CCR3P51677 355 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 KPNA1P52294 538 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 NLRP12P59046 1061 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 RBP5P82980 135 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PLCB2Q00722 1185 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 GAS6Q14393 721 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 LMBRD2Q68DH5 695 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 STXBP4Q6ZWJ1 553 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 OSTM1Q86WC4 334 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 RALGPS2Q86X27 583 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CBWD2Q8IUF1 395 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TOP6BLQ8N6T0 577 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 STKLD1Q8NE28 680 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SPATA18Q8TC71 538 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ZNF396Q96N95 335 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 LRRC27Q9C0I9 530 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ABCB6Q9NP58 842 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ZMYM5Q9UJ78 669 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SNX9Q9Y5X1 595 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PTPRDP23468 1912 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 GREB1Q4ZG55 1949 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 NCOR2Q9Y618 2525 aa17.88■□□□□ 0.45
CDK5RAP3-206ENST00000578018 EIF3DO15371 548 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 HCRTO43612 131 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PRPF40AO75400 957 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 F11P03951 625 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 MYL7Q01449 175 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TNK2Q07912 1038 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 LRRC32Q14392 662 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CCDC142Q17RM4 750 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CNNM4Q6P4Q7 775 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SHC4Q6S5L8 630 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ERMP1Q7Z2K6 904 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ADGRF2Q8IZF7 708 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CMTM8Q8IZV2 173 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CELF5Q8N6W0 485 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 OR5B17Q8NGF7 314 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TTC8Q8TAM2 541 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SNX21Q969T3 373 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 DHX58Q96C10 678 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 RMDN1Q96DB5 314 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 RBM12Q9NTZ6 932 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 INTS13Q9NVM9 706 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 HSPBP1Q9NZL4 362 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ANAPC1Q9H1A4 1944 aa17.87■□□□□ 0.45
CDK5RAP3-206ENST00000578018 GABRDO14764 452 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CUTAO60888 179 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CSH1P0DML2 217 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CSH2P0DML3 217 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CYP2F1P24903 491 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 DDX6P26196 483 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ASIC1P78348 528 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SATB1Q01826 763 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PPP2R5DQ14738 602 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SOWAHAQ2M3V2 549 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SDHAF4Q5VUM1 108 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 Q6ZS52 159 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 EPM2AIP1Q7L775 607 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SPEM1Q8N4L4 309 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ANKRD36BP1Q96IX9 119 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 NCDNQ9UBB6 729 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 GTF3C4Q9UKN8 822 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CCL26Q9Y258 94 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SPTBN2O15020 2390 aa17.86■□□□□ 0.45
CDK5RAP3-206ENST00000578018 ZNF233A6NK53 670 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TADA3O75528 432 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 NOL4O94818 638 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TNNC2P02585 160 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 PCSK1P29120 753 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 AVPR1AP37288 418 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CXCL12P48061 93 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 LHX1P48742 406 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 NRLP54845 237 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 RPL10AP62906 217 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 AMPD3Q01432 767 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 SURF1Q15526 300 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 DDR2Q16832 855 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 CFAP221Q4G0U5 840 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 DGKKQ5KSL6 1271 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 FAM26FQ5R3K3 315 aa17.85■□□□□ 0.45
CDK5RAP3-206ENST00000578018 TXNDC8Q6A555 127 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms