RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 GOLGA5Q8TBA6 731 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 CSGALNACT1Q8TDX6 532 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 CACTINQ8WUQ7 758 aaKnown RBP17.25■□□□□ 0.35
VAPA-204ENST00000577901 RSPRY1Q96DX4 576 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 CRISPLD1Q9H336 500 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 PARD6AQ9NPB6 346 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 AGPAT3Q9NRZ7 376 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 HOOK1Q9UJC3 728 aaKnown RBP17.25■□□□□ 0.35
VAPA-204ENST00000577901 TICRRQ7Z2Z1 1910 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
VAPA-204ENST00000577901 CHADO15335 359 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 TGFB1I1O43294 461 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 PRR29P0C7W0 189 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 ALDH1A3P47895 512 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 CXCL12P48061 93 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 GUCY2FP51841 1108 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 KPNA1P52294 538 aaPredicted RBP17.24■□□□□ 0.35
VAPA-204ENST00000577901 MLLT6P55198 1093 aaPredicted RBP17.24■□□□□ 0.35
VAPA-204ENST00000577901 SATB1Q01826 763 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 GPR17Q13304 367 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 SURF1Q15526 300 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 LPAL2Q16609 132 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 KIAA0895Q8NCT3 520 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 MSANTD3Q96H12 275 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 DNAJC25Q9H1X3 360 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 DPP3Q9NY33 737 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 HSPBP1Q9NZL4 362 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 SLC27A5Q9Y2P5 690 aa17.24■□□□□ 0.35
VAPA-204ENST00000577901 SLC38A8A6NNN8 435 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 CLIC2O15247 247 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 RHOBTB3O94955 611 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 FCHO2Q0JRZ9 810 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 MYBPC2Q14324 1141 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 LRRC32Q14392 662 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 GAS6Q14393 721 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 KCNB1Q14721 858 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 STXBP5Q5T5C0 1151 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 C9orf57Q5W0N0 161 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 LAIR1Q6GTX8 287 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 OVOS1Q6IE37 1185 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 CENPPQ6IPU0 288 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 C1orf228Q6PIY5 440 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 GPIHBP1Q8IV16 184 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 ARID3BQ8IVW6 561 aaPredicted RBP17.23■□□□□ 0.35
VAPA-204ENST00000577901 ZSWIM2Q8NEG5 633 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 ENGASEQ8NFI3 743 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 TIGD1Q96MW7 591 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 C8orf33Q9H7E9 229 aaPredicted RBP17.23■□□□□ 0.35
VAPA-204ENST00000577901 ASB3Q9Y575 518 aa17.23■□□□□ 0.35
VAPA-204ENST00000577901 PIRO00625 290 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 PPEF2O14830 753 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 TYMPP19971 482 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 SOX9P48436 509 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 TFAMQ00059 246 aaKnown RBP17.22■□□□□ 0.35
VAPA-204ENST00000577901 SPEM2Q0P670 501 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 PRR23BQ6ZRT6 265 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 DNAJB7Q7Z6W7 309 aaPredicted RBP17.22■□□□□ 0.35
VAPA-204ENST00000577901 C12orf56Q8IXR9 622 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 SPEM1Q8N4L4 309 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 XXYLT1Q8NBI6 393 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 ATAD1Q8NBU5 361 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 RTKNQ9BST9 563 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 RMND1Q9NWS8 449 aa17.22■□□□□ 0.35
VAPA-204ENST00000577901 ANO9A1A5B4 782 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 MTMR11A4FU01 709 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 SOAT2O75908 522 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 SMC2O95347 1197 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 FGF19O95750 216 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 ODC1P11926 461 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 CYP2J2P51589 502 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 LILRA4P59901 499 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 DMWDQ09019 674 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 SNRNP35Q16560 246 aaKnown RBP17.21■□□□□ 0.35
VAPA-204ENST00000577901 CBWD2Q8IUF1 395 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 EFCAB13Q8IY85 973 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 TTC9BQ8N6N2 239 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 RDH13Q8NBN7 331 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 PSMG2Q969U7 264 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 TMEM209Q96SK2 561 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 ATXN3LQ9H3M9 355 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 PDE11AQ9HCR9 933 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 RBM12Q9NTZ6 932 aaKnown RBP17.21■□□□□ 0.35
VAPA-204ENST00000577901 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
VAPA-204ENST00000577901 NCOR2Q9Y618 2525 aa17.21■□□□□ 0.35
VAPA-204ENST00000577901 MYBPHLA2RUH7 354 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 DCDC2BA2VCK2 349 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 CHURC1-FNTBB4DL54 471 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 SPECC1L-ADORA2AF8WAN1 911 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 PDXKO00764 312 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 DPYSL4O14531 572 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 EXOC3O60645 756 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 RETP07949 1114 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 TMEM191BP0C7N4 346 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 GABRR2P28476 465 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 PNPLA4P41247 253 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 FNTBP49356 437 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 PNOCQ13519 176 aa17.2■□□□□ 0.34
VAPA-204ENST00000577901 SIM2Q14190 667 aaPredicted RBP17.2■□□□□ 0.34
VAPA-204ENST00000577901 ARHGAP29Q52LW3 1261 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms