RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 SLC27A1Q6PCB7 646 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 CXCL17Q6UXB2 119 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 SCARA5Q6ZMJ2 495 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 IFT20Q8IY31 132 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 RASGEF1CQ8N431 466 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 USP38Q8NB14 1042 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 KLHL23Q8NBE8 558 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 MTG1Q9BT17 334 aaPredicted RBP14.6□□□□□ -0.07
RNF43-202ENST00000577625 DDX3YO15523 660 aaKnown RBP14.6□□□□□ -0.07
RNF43-202ENST00000577625 ITGB3P05106 788 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 CFHP08603 1231 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 KRT19P08727 400 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 GNAT1P11488 350 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 NKX3-2P78367 333 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 BLMHQ13867 455 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 TMEM132DQ14C87 1099 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 CWF19L1Q69YN2 538 aaKnown RBP14.6□□□□□ -0.07
RNF43-202ENST00000577625 NOTUMQ6P988 496 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 ZNF564Q8TBZ8 553 aaPredicted RBP14.6□□□□□ -0.07
RNF43-202ENST00000577625 TRIM11Q96F44 468 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 NUP85Q9BW27 656 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 EIF2AQ9BY44 585 aaKnown RBP14.6□□□□□ -0.07
RNF43-202ENST00000577625 CISHQ9NSE2 258 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 RNF186Q9NXI6 227 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 CHORDC1Q9UHD1 332 aaPredicted RBP14.6□□□□□ -0.07
RNF43-202ENST00000577625 TMEM59LQ9UK28 342 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 POLIQ9UNA4 740 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 C2CD2Q9Y426 696 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 ALG6Q9Y672 507 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 RPS6KL1Q9Y6S9 549 aa14.6□□□□□ -0.07
RNF43-202ENST00000577625 CEP104O60308 925 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 LUC7L3O95232 432 aaKnown RBP14.59□□□□□ -0.07
RNF43-202ENST00000577625 GSTA1P08263 222 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 WEE2P0C1S8 567 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 MYBL1P10243 752 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 CD58P19256 250 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 PAK2Q13177 524 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 PPP1R7Q15435 360 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 PIK3R5Q8WYR1 880 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 ZNF570Q96NI8 536 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 RPS6KC1Q96S38 1066 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.59□□□□□ -0.079e-8■■□□□ 13.1
RNF43-202ENST00000577625 YIPF3Q9GZM5 350 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 CARD9Q9H257 536 aa14.59□□□□□ -0.07
RNF43-202ENST00000577625 AVENQ9NQS1 362 aaPredicted RBP14.59□□□□□ -0.07
RNF43-202ENST00000577625 CNOT8Q9UFF9 292 aaKnown RBP14.59□□□□□ -0.07
RNF43-202ENST00000577625 GOLGA6L10A6NI86 522 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 MIF4GDA9UHW6 222 aaKnown RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 PGRMC1O00264 195 aaKnown RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 ADAMTS4O75173 837 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 RARBP10826 455 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 ELNP15502 786 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 CCND3P30281 292 aaPredicted RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 PAPOLAP51003 745 aaKnown RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 GUCY2FP51841 1108 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 BYSLQ13895 437 aaKnown RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 GKAP1Q5VSY0 366 aaPredicted RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 PPP1R2P3Q6NXS1 205 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 C8orf74Q6P047 294 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 APBB1IPQ7Z5R6 666 aaPredicted RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 MCOLN2Q8IZK6 566 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 NME8Q8N427 588 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 BCO2Q9BYV7 579 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 CXCL16Q9H2A7 254 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 GTF2IRD1Q9UHL9 959 aa14.58□□□□□ -0.07
RNF43-202ENST00000577625 TTC7AQ9ULT0 858 aaPredicted RBP14.58□□□□□ -0.07
RNF43-202ENST00000577625 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.58□□□□□ -0.07
RNF43-202ENST00000577625 A6NHS1 94 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 THAP12O43422 761 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 COQ9O75208 318 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 PRKAR2AP13861 404 aaKnown RBP14.58□□□□□ -0.08
RNF43-202ENST00000577625 AXLP30530 894 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 NSFP46459 744 aaKnown RBP14.58□□□□□ -0.08
RNF43-202ENST00000577625 CRYBB1P53674 252 aaPredicted RBP14.58□□□□□ -0.08
RNF43-202ENST00000577625 NOMO3P69849 1222 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 ROR2Q01974 943 aaKnown RBP14.58□□□□□ -0.08
RNF43-202ENST00000577625 QPCTQ16769 361 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 ZNF667Q5HYK9 610 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 NT5DC4Q86YG4 428 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 ZNF606Q8WXB4 792 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 CPA5Q8WXQ8 436 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 SNX27Q96L92 541 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 CFHR5Q9BXR6 569 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 VRTNQ9H8Y1 702 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 SPC25Q9HBM1 224 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 TMBIM4Q9HC24 238 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 GDF3Q9NR23 364 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 CREBZFQ9NS37 354 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 SNTG2Q9NY99 539 aa14.58□□□□□ -0.08
RNF43-202ENST00000577625 NXF1Q9UBU9 619 aaKnown RBP14.58□□□□□ -0.08
RNF43-202ENST00000577625 PIN4Q9Y237 131 aaKnown RBP14.58□□□□□ -0.08
RNF43-202ENST00000577625 NOC2LQ9Y3T9 749 aaKnown RBP14.58□□□□□ -0.08
RNF43-202ENST00000577625 CFAP73A6NFT4 308 aa14.57□□□□□ -0.08
RNF43-202ENST00000577625 PAEPP09466 180 aa14.57□□□□□ -0.08
RNF43-202ENST00000577625 POLR2BP30876 1174 aaKnown RBP14.57□□□□□ -0.08
RNF43-202ENST00000577625 RNASE9P60153 205 aaKnown RBP14.57□□□□□ -0.08
RNF43-202ENST00000577625 YWHAEP62258 255 aaKnown RBP14.57□□□□□ -0.08
RNF43-202ENST00000577625 WDR72Q3MJ13 1102 aa14.57□□□□□ -0.08
RNF43-202ENST00000577625 TAF2Q6P1X5 1199 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms