RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 AXIN1O15169 862 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 PRPF6O94906 941 aaKnown RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 KCNA4P22459 653 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 MCM2P49736 904 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 PSMC1P62191 440 aaKnown RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 LMNB2Q03252 620 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 BFSP1Q12934 665 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 ARHGAP29Q52LW3 1261 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 ARHGAP15Q53QZ3 475 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 PRR23CQ6ZRP0 262 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 ITIH5Q86UX2 942 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 KBTBD6Q86V97 674 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 LONP2Q86WA8 852 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 RALGPS2Q86X27 583 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 SFTPA1Q8IWL2 248 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 CD302Q8IX05 232 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 KCTD17Q8N5Z5 321 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 CELF5Q8N6W0 485 aaKnown RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 OR5B17Q8NGF7 314 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 FAM126AQ9BYI3 521 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 MTMR12Q9C0I1 747 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 ASB7Q9H672 318 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 C8orf33Q9H7E9 229 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 MRPL44Q9H9J2 332 aaKnown RBP12.96□□□□□ -0.33
PRPF8-215ENST00000576958 KIAA1549LQ6ZVL6 1849 aa12.96□□□□□ -0.33
PRPF8-215ENST00000576958 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.34
PRPF8-215ENST00000576958 C2orf78A6NCI8 922 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
PRPF8-215ENST00000576958 GCNT3O95395 438 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 RETP07949 1114 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 LMO2P25791 158 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 HOXD13P35453 343 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 USP46P62068 366 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 ZXDBP98169 803 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 RUNX3Q13761 415 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 LRRC32Q14392 662 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 VEPH1Q14D04 833 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 KYAT1Q16773 422 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 ITPRIPL2Q3MIP1 535 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 L1TD1Q5T7N2 865 aaKnown RBP12.95□□□□□ -0.34
PRPF8-215ENST00000576958 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 BRSK2Q8IWQ3 736 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 KRI1Q8N9T8 703 aaKnown RBP12.95□□□□□ -0.34
PRPF8-215ENST00000576958 TCEAL3Q969E4 200 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 HHIPQ96QV1 700 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 USP28Q96RU2 1077 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 OXCT2Q9BYC2 517 aaPredicted RBP12.95□□□□□ -0.34
PRPF8-215ENST00000576958 ARRDC1-AS1Q9H2J1 176 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 TRPC7Q9HCX4 862 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 DDX43Q9NXZ2 648 aaKnown RBP12.95□□□□□ -0.34
PRPF8-215ENST00000576958 KCNG1Q9UIX4 513 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 INVSQ9Y283 1065 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 PCDHB5Q9Y5E4 795 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
PRPF8-215ENST00000576958 GREB1Q4ZG55 1949 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 RNF40O75150 1001 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
PRPF8-215ENST00000576958 KRT19P08727 400 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 IDEP14735 1019 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 CASP1P29466 404 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 CDC25CP30307 473 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 TUFMP49411 452 aaKnown RBP12.94□□□□□ -0.34
PRPF8-215ENST00000576958 GALK1P51570 392 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 NRLP54845 237 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
PRPF8-215ENST00000576958 MESP2Q0VG99 397 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 TAF12Q16514 161 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 SOWAHAQ2M3V2 549 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 TMEM196Q5HYL7 178 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 INTS6LQ5JSJ4 861 aaKnown RBP12.94□□□□□ -0.34
PRPF8-215ENST00000576958 SLFN12LQ6IEE8 588 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 BRAPQ7Z569 592 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 WDR5BQ86VZ2 330 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 THEM5Q8N1Q8 247 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 CSGALNACT2Q8N6G5 542 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 PDILTQ8N807 584 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 SPPL2BQ8TCT7 592 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 KBTBD7Q8WVZ9 684 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 SECISBP2LQ93073 1101 aaKnown RBP12.94□□□□□ -0.34
PRPF8-215ENST00000576958 LINC00597Q9H2U6 94 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 TMEM30AQ9NV96 361 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 OBP2AQ9NY56 170 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 RBAKQ9NYW8 714 aaPredicted RBP12.94□□□□□ -0.34
PRPF8-215ENST00000576958 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
PRPF8-215ENST00000576958 RAB23Q9ULC3 237 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 SNX9Q9Y5X1 595 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 USP24Q9UPU5 2620 aa12.94□□□□□ -0.34
PRPF8-215ENST00000576958 SLC26A4O43511 780 aa12.93□□□□□ -0.34
PRPF8-215ENST00000576958 AVPR1AP37288 418 aa12.93□□□□□ -0.34
PRPF8-215ENST00000576958 CACNA2D1P54289 1103 aa12.93□□□□□ -0.34
PRPF8-215ENST00000576958 CUL4AQ13619 759 aa12.93□□□□□ -0.34
PRPF8-215ENST00000576958 SV2CQ496J9 727 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms