RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ACDQ96AP0 544 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 HHIPQ96QV1 700 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 P2RY13Q9BPV8 354 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 EDEM2Q9BV94 578 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 CCSER1Q9C0I3 900 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 SMOC1Q9H4F8 434 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 DPP3Q9NY33 737 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 PCDHB5Q9Y5E4 795 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 SCN1AP35498 2009 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 SDK1Q7Z5N4 2213 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 TRAK2O60296 914 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 TBCAO75347 108 aaKnown RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 KRT18P05783 430 aaKnown RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 PROS1P07225 676 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 CSH1P0DML2 217 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 CSH2P0DML3 217 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 ARSAP15289 507 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 CDR1P51861 262 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 ZNF131P52739 623 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 TSPY1Q01534 308 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 CREB5Q02930 508 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 ZNF268Q14587 947 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 NFE2Q16621 373 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 MCTP1Q6DN14 999 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 TMEM150AQ86TG1 271 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 C11orf74Q86VG3 221 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 MON1AQ86VX9 555 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 GPBP1Q86WP2 473 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 CHFRQ96EP1 664 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 AK8Q96MA6 479 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 ZNF560Q96MR9 790 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 DUSP15Q9H1R2 295 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 ZHX3Q9H4I2 956 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 UXTQ9UBK9 157 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 EBF1Q9UH73 591 aa12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 MAGED2Q9UNF1 606 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-212ENST00000576613 KIAA1549LQ6ZVL6 1849 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 KPNA7A9QM74 516 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 CAVIN2O95810 425 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 F11P03951 625 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 HMGA1P17096 107 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 GJA4P35212 333 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 UBA7P41226 1012 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 ACOT2P49753 483 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 NOVA1P51513 510 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 GALK1P51570 392 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 DHX8Q14562 1220 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 DMC1Q14565 340 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 MTF1Q14872 753 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 DAB2IPQ5VWQ8 1189 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 WSCD1Q658N2 575 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 TXNDC8Q6A555 127 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 ADALQ6DHV7 355 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 SLFN12LQ6IEE8 588 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 TCEAL6Q6IPX3 200 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 SLC39A4Q6P5W5 647 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 LRRTM3Q86VH5 581 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 RPLP0P6Q8NHW5 317 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 ATP2A3Q93084 1043 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 TCEAL3Q969E4 200 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 ATG2BQ96BY7 2078 aa12.55□□□□□ -0.4
CTDNEP1-212ENST00000576613 BCLAF3A2AJT9 711 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 IL18RAPO95256 599 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 CKMP06732 381 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 USP17L7P0C7H9 530 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 GBP1P32455 592 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 PNPLA4P41247 253 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 IFNAR2P48551 515 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 RPL10AP62906 217 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 GTF2BQ00403 316 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 FAM160A1Q05DH4 1040 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 NR1H3Q13133 447 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 PSMD2Q13200 908 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 NT5DC4Q86YG4 428 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 TTC16Q8NEE8 873 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 LEO1Q8WVC0 666 aaPredicted RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 OSCP1Q8WVF1 389 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 CD101Q93033 1021 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 TRMT2BQ96GJ1 504 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 ECT2Q9H8V3 914 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 FBRSL1Q9HCM7 1045 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 ABCB6Q9NP58 842 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 POLR3BQ9NW08 1133 aaPredicted RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 DUS2Q9NX74 493 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 AGO2Q9UKV8 859 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 MYO16Q9Y6X6 1858 aa12.54□□□□□ -0.4
CTDNEP1-212ENST00000576613 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 TRAV19A0A0A6YYK7 116 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 LNP1A1A4G5 178 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 C4orf47A7E2U8 309 aa12.53□□□□□ -0.4
CTDNEP1-212ENST00000576613 KHNYNO15037 678 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms