RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 KNDC1Q76NI1 1749 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 ABLIM1O14639 778 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 SSTR1P30872 391 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 GTF2H1P32780 548 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 GPAT2Q6NUI2 795 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 C4orf32Q8N8J7 132 aa13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 EIF2AQ9BY44 585 aaKnown RBP13.69□□□□□ -0.22
PCDHGB3-201ENST00000576222 E2F8A0AVK6 867 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 ATP9BO43861 1147 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 DGAT1O75907 488 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 PAMP19021 973 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZNF268Q14587 947 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 RASGEF1CQ8N431 466 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 DDHD1Q8NEL9 900 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 PREX1Q8TCU6 1659 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 XPOTO43592 962 aaKnown RBP13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 CLEC16AQ2KHT3 1053 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 WLSQ5T9L3 541 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 DCAF15Q66K64 600 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZNF572Q7Z3I7 529 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 TAS1R2Q8TE23 839 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 GDPD5Q8WTR4 605 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 SIKE1Q9BRV8 207 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 MMADHCQ9H3L0 296 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 PCDH9Q9HC56 1237 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZNF229Q9UJW7 825 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 YWHAHQ04917 246 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 OASLQ15646 514 aaKnown RBP13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 WDR72Q3MJ13 1102 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 FAXCQ5TGI0 409 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 PLA2G4FQ68DD2 849 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 NCAPG2Q86XI2 1143 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 MYLK4Q86YV6 388 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 SLC12A6Q9UHW9 1150 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZBTB39O15060 712 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 THRAP10827 490 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 MARCKSL1P49006 195 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 SERPINB8P50452 374 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 PDK4Q16654 411 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 SPOCD1Q6ZMY3 1216 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 ARHGEF19Q8IW93 802 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 DEFB107AQ8IZN7 70 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 FAM13CQ8NE31 585 aa13.68□□□□□ -0.22
PCDHGB3-201ENST00000576222 NCANO14594 1321 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 CLTCQ00610 1675 aaKnown RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 PAEPP09466 180 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 SPRP35270 261 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 CBWD6Q4V339 395 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 TTC33Q6PID6 262 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZCCHC9Q8N567 271 aaKnown RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 ETNPPLQ8TBG4 499 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 CYGBQ8WWM9 190 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 ALG3Q92685 438 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 TLCD1Q96CP7 247 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 MRPL4Q9BYD3 311 aaKnown RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 SUGT1Q9Y2Z0 365 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 PPIDQ08752 370 aaKnown RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 ARL13BQ3SXY8 428 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 RNF135Q8IUD6 432 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 MCOLN2Q8IZK6 566 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 FITM2Q8N6M3 262 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 ACTL9Q8TC94 416 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 BTBD7Q9P203 1132 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 TBX20Q9UMR3 447 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 C5orf60A6NFR6 353 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 CASP5P51878 434 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 HABP4Q5JVS0 413 aaKnown RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 CYP4A22Q5TCH4 519 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 EEPD1Q7L9B9 569 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 GPR141Q7Z602 305 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 NLGN1Q8N2Q7 840 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 GORASP1Q9BQQ3 440 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 MMTAG2Q9BU76 263 aaKnown RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 FRMD8P1Q9BZ68 369 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 ADNPQ9H2P0 1102 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 DMAP1Q9NPF5 467 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 APPL1Q9UKG1 709 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 CDYLQ9Y232 598 aa13.67□□□□□ -0.22
PCDHGB3-201ENST00000576222 DPPA5A6NC42 116 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 GLRA3O75311 464 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 SREBF1P36956 1147 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZNF398Q8TD17 642 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 CEP19Q96LK0 163 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 DDX50Q9BQ39 737 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 GID8Q9NWU2 228 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ANGPTL3Q9Y5C1 460 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ALADP13716 330 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 CHKAP35790 457 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 CUL2Q13617 745 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 GSTA3Q16772 222 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 FOXR2Q6PJQ5 311 aa13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 ZC3H15Q8WU90 426 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 PSPC1Q8WXF1 523 aaKnown RBP13.66□□□□□ -0.22
PCDHGB3-201ENST00000576222 VPS33BQ9H267 617 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms