RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 E9PMD0 336 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 H0Y626 953 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 TRIM16O95361 564 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 DDX6P26196 483 aaKnown RBP eCLIP17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 TNFSF9P41273 254 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 IFNAR2P48551 515 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 ATXN3P54252 364 aaPredicted RBP17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 PPP2R3AQ06190 1150 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 MCL1Q07820 350 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 MTF1Q14872 753 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 COL28A1Q2UY09 1125 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 PIP4P1Q86T03 277 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 MON1AQ86VX9 555 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 RASSF3Q86WH2 238 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 STKLD1Q8NE28 680 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 MDGA1Q8NFP4 955 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 CCDC26Q8TAB7 109 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 FAM212AQ96EL1 285 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 CNOT6LQ96LI5 555 aaKnown RBP17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 RUSC1Q9BVN2 902 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 GTPBP2Q9BX10 602 aaKnown RBP17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 ABI2Q9NYB9 513 aaPredicted RBP17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 LRWD1Q9UFC0 647 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 MBD1Q9UIS9 605 aaPredicted RBP17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 DNM3Q9UQ16 869 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 WNT6Q9Y6F9 365 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 CELSR3Q9NYQ7 3312 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 ABCA7Q8IZY2 2146 aa17.62■□□□□ 0.41
CTDNEP1-211ENST00000575783 ANTXRLA6NF34 631 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 XPOTO43592 962 aaKnown RBP17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 CFIP05156 583 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 HAPLN1P10915 354 aaPredicted RBP17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 HMGA1P17096 107 aaKnown RBP17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 PTGER3P43115 390 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 FAM193AP78312 1265 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 SEMA3BQ13214 749 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 LRRTM3Q86VH5 581 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 SYT12Q8IV01 421 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 HDDC3Q8N4P3 179 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 FRMD1Q8N878 549 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 USP33Q8TEY7 942 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 OSCP1Q8WVF1 389 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 ATP2A3Q93084 1043 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 HAPLN2Q9GZV7 340 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 TRPC7Q9HCX4 862 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 FSCN3Q9NQT6 498 aa17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 NUP210Q8TEM1 1887 aaPredicted RBP17.61■□□□□ 0.41
CTDNEP1-211ENST00000575783 FAM221BA6H8Z2 402 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 TNFRSF10BO14763 440 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 CAPNS1P04632 268 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 RAD51AP2Q09MP3 1159 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 SCAPQ12770 1279 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 NR1H3Q13133 447 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 MAPK7Q13164 816 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 ZNF268Q14587 947 aaPredicted RBP17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 RINT1Q6NUQ1 792 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 ZPBP2Q6X784 338 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 CENPQQ7L2Z9 268 aaPredicted RBP17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 METTL23Q86XA0 190 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 THEM5Q8N1Q8 247 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 SNX29Q8TEQ0 813 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 BICD1Q96G01 975 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 FNBP1Q96RU3 617 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 CYP2S1Q96SQ9 504 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 NTPCRQ9BSD7 190 aaKnown RBP17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 ATXN2Q99700 1313 aaKnown RBP17.6■□□□□ 0.41
CTDNEP1-211ENST00000575783 CACNA1EQ15878 2313 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 EIF4E1BA6NMX2 242 aaKnown RBP17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 K7EQS6 105 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 ALDH1A2O94788 518 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 GPR15P49685 360 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 SMTNP53814 917 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 GUCY1B3Q02153 619 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 CRY1Q16526 586 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 EML3Q32P44 896 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 SDHAF4Q5VUM1 108 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 SPATA1Q5VX52 437 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 EFCAB13Q8IY85 973 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 TMEM161BQ8NDZ6 487 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 SPPL2BQ8TCT7 592 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 C2orf15Q8WU43 125 aaKnown RBP17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 SPACA7Q96KW9 195 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 LINC00597Q9H2U6 94 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 RPF1Q9H9Y2 349 aaKnown RBP17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 MMP17Q9ULZ9 603 aa17.59■□□□□ 0.41
CTDNEP1-211ENST00000575783 UPK3BL1B0FP48 263 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 UPK3BL2E5RIL1 263 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 CYB561D2O14569 222 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 JAK2O60674 1132 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 CYP11A1P05108 521 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 MAPTP10636 758 aaKnown RBP17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 P2RY2P41231 377 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 FAM160A1Q05DH4 1040 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 SAFBQ15424 915 aaKnown RBP eCLIP17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 ENOX2Q16206 610 aaKnown RBP17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 C9orf57Q5W0N0 161 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 JADE1Q6IE81 842 aa17.58■□□□□ 0.4
CTDNEP1-211ENST00000575783 SLC23A3Q6PIS1 610 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms