RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 PARD3BQ8TEW8 1205 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 RSPRY1Q96DX4 576 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 SHDQ96IW2 340 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 PI4K2AQ9BTU6 479 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 IRF2BPLQ9H1B7 796 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 GTF3C4Q9UKN8 822 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 TRAF3IP3Q9Y228 551 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 NME7Q9Y5B8 376 aa21.12■□□□□ 0.97
SCARF1-208ENST00000574545 MYBPHLA2RUH7 354 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 FGF19O95750 216 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 FAM163BP0C2L3 166 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 PSMC3P17980 439 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 WARSP23381 471 aaKnown RBP21.11■□□□□ 0.97
SCARF1-208ENST00000574545 WEE1P30291 646 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 GPR15P49685 360 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 NUCB2P80303 420 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 GRM2Q14416 872 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 TMEM150AQ86TG1 271 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 ALYREFQ86V81 257 aaKnown RBP21.11■□□□□ 0.97
SCARF1-208ENST00000574545 MFSD6LQ8IWD5 586 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 GIPC2Q8TF65 315 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 XYLT2Q9H1B5 865 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 ATXN3LQ9H3M9 355 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 ABCB6Q9NP58 842 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 TRPV5Q9NQA5 729 aa21.11■□□□□ 0.97
SCARF1-208ENST00000574545 R3HCC1Q9Y3T6 440 aaKnown RBP21.11■□□□□ 0.97
SCARF1-208ENST00000574545 KANSL1LA0AUZ9 987 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 LRRIQ3A6PVS8 624 aaPredicted RBP21.1■□□□□ 0.97
SCARF1-208ENST00000574545 STK25O00506 426 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 TACC1O75410 805 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 F11P03951 625 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 C4BPAP04003 597 aaKnown RBP21.1■□□□□ 0.97
SCARF1-208ENST00000574545 GLULP15104 373 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 CYP2F1P24903 491 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 PCSK1P29120 753 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 KCNB1Q14721 858 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 VEPH1Q14D04 833 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 CFAP221Q4G0U5 840 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 ARID3BQ8IVW6 561 aaPredicted RBP21.1■□□□□ 0.97
SCARF1-208ENST00000574545 PJA1Q8NG27 643 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 FAM200AQ8TCP9 573 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 DEPDC1BQ8WUY9 529 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 DNASE1L2Q92874 299 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 LRRC3BQ96PB8 259 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 TRMT61BQ9BVS5 477 aaKnown RBP21.1■□□□□ 0.97
SCARF1-208ENST00000574545 FOXQ1Q9C009 403 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 CRTAC1Q9NQ79 661 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 SIT1Q9Y3P8 196 aa21.1■□□□□ 0.97
SCARF1-208ENST00000574545 HEPACAM2A8MVW5 462 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 ARNTLO00327 626 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 ATP2C2O75185 946 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 NR3C1P04150 777 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 DCNP07585 359 aaKnown RBP21.09■□□□□ 0.97
SCARF1-208ENST00000574545 MRE11P49959 708 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 NFIL3Q16649 462 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 FMR1NBQ8N0W7 255 aaPredicted RBP21.09■□□□□ 0.97
SCARF1-208ENST00000574545 E2F7Q96AV8 911 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 FUBP3Q96I24 572 aaKnown RBP eCLIP21.09■□□□□ 0.97
SCARF1-208ENST00000574545 MRPL45Q9BRJ2 306 aaKnown RBP21.09■□□□□ 0.97
SCARF1-208ENST00000574545 OSBPL6Q9BZF3 934 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 TASP1Q9H6P5 420 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 VRTNQ9H8Y1 702 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 HEBP1Q9NRV9 189 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 FAM86C1Q9NVL1 165 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 CDH9Q9ULB4 789 aa21.09■□□□□ 0.97
SCARF1-208ENST00000574545 LRRN2O75325 713 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 CDC25CP30307 473 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 ATICP31939 592 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 AP3M2P53677 418 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 MYL6P60660 151 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 CYP4F8P98187 520 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 FCHO2Q0JRZ9 810 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 DDR2Q16832 855 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 GPR158Q5T848 1215 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 SDHAF4Q5VUM1 108 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 TDRD10Q5VZ19 366 aaKnown RBP21.08■□□□□ 0.97
SCARF1-208ENST00000574545 ENGASEQ8NFI3 743 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 ATOH1Q92858 354 aaPredicted RBP21.08■□□□□ 0.97
SCARF1-208ENST00000574545 IRF7Q92985 503 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 SYT15Q9BQS2 421 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 SLC46A2Q9BY10 475 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 SLITRK6Q9H5Y7 841 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 BRD9Q9H8M2 597 aa21.08■□□□□ 0.97
SCARF1-208ENST00000574545 MTF2Q9Y483 593 aaPredicted RBP21.08■□□□□ 0.97
SCARF1-208ENST00000574545 COL4A2P08572 1712 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 CACNA1IQ9P0X4 2223 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 NOL4O94818 638 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 VNN1O95497 513 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 CSH1P0DML2 217 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 CSH2P0DML3 217 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 CD72P21854 359 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 GDI1P31150 447 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 NLRP12P59046 1061 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 DLG4P78352 724 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 FZD5Q13467 585 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 WDR72Q3MJ13 1102 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 C1orf220Q5T0J3 134 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 ZNF687Q8N1G0 1237 aa21.07■□□□□ 0.96
SCARF1-208ENST00000574545 GUF1Q8N442 669 aaKnown RBP21.07■□□□□ 0.96
SCARF1-208ENST00000574545 STKLD1Q8NE28 680 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms