RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MSLNQ13421 630 aaPredicted RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 MORF4L2Q15014 288 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 MFSD14BQ5SR56 506 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 FNBP1LQ5T0N5 605 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 CCDC174Q6PII3 467 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 RNF111Q6ZNA4 994 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 PRPF39Q86UA1 669 aaKnown RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 XXYLT1Q8NBI6 393 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 NGLY1Q96IV0 654 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 FAM84AQ96KN4 292 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 TMEM121Q9BTD3 319 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 C10orf88Q9H8K7 445 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 ZNF395Q9H8N7 513 aaPredicted RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 DDX4Q9NQI0 724 aaKnown RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 TOPORSQ9NS56 1045 aaPredicted RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 MARCOQ9UEW3 520 aaPredicted RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 SPECC1L-ADORA2AF8WAN1 911 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 C6orf229H3BNL8 230 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 MT-ND3P03897 115 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 ADRB2P07550 413 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 TCF4P15884 667 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 ALDH18A1P54886 795 aaKnown RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 UBXN2AP68543 259 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 PLCB3Q01970 1234 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 TMEM62Q0P6H9 643 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 ASPHQ12797 758 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 HNRNPDQ14103 355 aaKnown RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 HIF1AQ16665 826 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 ALLCQ8N6M5 410 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 DCAKDQ8WVC6 231 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 ABTB1Q969K4 478 aaPredicted RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 RBM17Q96I25 401 aaKnown RBP15.12■□□□□ 0.01
SMG6-215ENST00000574501 SERAC1Q96JX3 654 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 PI4K2AQ9BTU6 479 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 WDR18Q9BV38 432 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 MECRQ9BV79 373 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 STRA6Q9BX79 667 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 SMYD3Q9H7B4 428 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 TUFT1Q9NNX1 390 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 SERPINB13Q9UIV8 391 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 ZNF510Q9Y2H8 683 aa15.12■□□□□ 0.01
SMG6-215ENST00000574501 SRCAPQ6ZRS2 3230 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 CCDC160A6NGH7 325 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 ARHGAP42A6NI28 874 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 SORBS2O94875 1100 aaKnown RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 SETSIPP0DME0 302 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 UNGP13051 313 aaPredicted RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 UQCRBP14927 111 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 VCLP18206 1134 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 HIRAP54198 1017 aaPredicted RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 PDE1BQ01064 536 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 NFX1Q12986 1120 aaKnown RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 NCOA4Q13772 614 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 RHPN2Q8IUC4 686 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 ZNF513Q8N8E2 541 aaPredicted RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 FAM172AQ8WUF8 416 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 ACSF2Q96CM8 615 aaPredicted RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 SH2D3AQ9BRG2 576 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 S100A14Q9HCY8 104 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 ADAMTS6Q9UKP5 1117 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 BLOC1S6Q9UL45 172 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 SGK1O00141 431 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 TMCC1O94876 653 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 CYP3A4P08684 503 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 DESP17661 470 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 PEX2P28328 305 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 SHMT1P34896 483 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 ETV4P43268 484 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 MAGEA10P43363 369 aaPredicted RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 IKQ13123 557 aaPredicted RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 DBN1Q16643 649 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 MMEL1Q495T6 779 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 TMCO4Q5TGY1 634 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 ANKRD22Q5VYY1 191 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 RBM44Q6ZP01 1051 aaKnown RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 DHDDSQ86SQ9 333 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 CBWD2Q8IUF1 395 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 PASD1Q8IV76 773 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 KATNAL2Q8IYT4 538 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 HIPK4Q8NE63 616 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 MIPOL1Q8TD10 442 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 TAS1R2Q8TE23 839 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 USP6NLQ92738 828 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 SETDB2Q96T68 719 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 CD209Q9NNX6 404 aa15.11■□□□□ 0.01
SMG6-215ENST00000574501 SRP68Q9UHB9 627 aaKnown RBP15.11■□□□□ 0.01
SMG6-215ENST00000574501 ARHGEF35A5YM69 484 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 PRR5-ARHGAP8B1AHC4 643 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 PSTPIP1O43586 416 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 HPCAP84074 193 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 ARHGAP8P85298 464 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 ALCAMQ13740 583 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 UBAP2LQ14157 1087 aaKnown RBP15.1■□□□□ 0.01
SMG6-215ENST00000574501 PDK3Q15120 406 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 ARID3BQ8IVW6 561 aaPredicted RBP15.1■□□□□ 0.01
SMG6-215ENST00000574501 FBXO36Q8NEA4 188 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 SLC26A7Q8TE54 656 aa15.1■□□□□ 0.01
SMG6-215ENST00000574501 C11orf70Q9BRQ4 267 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms