RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 HSFX1Q9UBD0 423 aa10.38□□□□□ -0.75
NPLOC4-216ENST00000574344 NDRG2Q9UN36 371 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-216ENST00000574344 L1RE1Q9UN81 338 aa10.38□□□□□ -0.75
NPLOC4-216ENST00000574344 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-216ENST00000574344 CFAP54Q96N23 3096 aa10.38□□□□□ -0.75
NPLOC4-216ENST00000574344 WDR87Q6ZQQ6 2873 aa10.38□□□□□ -0.75
NPLOC4-216ENST00000574344 PROB1E7EW31 1015 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 CLIC2O15247 247 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 KINO60870 393 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 DLATP10515 647 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 GLULP15104 373 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 ATF6P18850 670 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 TNNI1P19237 187 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 ACAT1P24752 427 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 TARSP26639 723 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 SNRNP35Q16560 246 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 NFE2Q16621 373 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 RESP18Q5W5W9 173 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 GAREM2Q75VX8 874 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 ASCL5Q7RTU5 278 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 LRRTM3Q86VH5 581 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 MFSD6LQ8IWD5 586 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 GRAMD1CQ8IYS0 662 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 TMEM86AQ8N2M4 240 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 BORCS6Q96GS4 357 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 PI4K2AQ9BTU6 479 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 DDX23Q9BUQ8 820 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 LRRC3Q9BY71 257 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 KIAA1586Q9HCI6 787 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 SLC39A2Q9NP94 309 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 AGPAT3Q9NRZ7 376 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 EXOC1Q9NV70 894 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 INTS13Q9NVM9 706 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 DLGAP2Q9P1A6 1054 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 MTF2Q9Y483 593 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 PIAS3Q9Y6X2 628 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 MYO16Q9Y6X6 1858 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 R4GN57 208 aa10.37□□□□□ -0.75
NPLOC4-216ENST00000574344 NCANO14594 1321 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 PTPRJQ12913 1337 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 F5P12259 2224 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 MAN2B1O00754 1011 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 CAVIN2O95810 425 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 HAPLN1P10915 354 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 PCSK1P29120 753 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 MAGEA9P43362 315 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 LHX1P48742 406 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 CUL4BQ13620 913 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 DUOXA2Q1HG44 320 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 INTS6LQ5JSJ4 861 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 CNNM4Q6P4Q7 775 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 EPM2AIP1Q7L775 607 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 SPATA2LQ8IUW3 424 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 WDR49Q8IV35 697 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 ARID3BQ8IVW6 561 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 TOP6BLQ8N6T0 577 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 XXYLT1Q8NBI6 393 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 STKLD1Q8NE28 680 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 OR5B17Q8NGF7 314 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 ZNF507Q8TCN5 953 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 HPDLQ96IR7 371 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 MMS19Q96T76 1030 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 NELL2Q99435 816 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 HINFPQ9BQA5 517 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 ACBD6Q9BR61 282 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 OSBPL6Q9BZF3 934 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 CLSTN2Q9H4D0 955 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 TRPV4Q9HBA0 871 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 TMLHEQ9NVH6 421 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 GDAP2Q9NXN4 497 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 SERTAD1Q9UHV2 236 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 SIX4Q9UIU6 781 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 FAM186AA6NE01 2351 aa10.36□□□□□ -0.75
NPLOC4-216ENST00000574344 ATG2BQ96BY7 2078 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 FRYLO94915 3013 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 PVALEFA0A1B0GWK0 134 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 SLC38A8A6NNN8 435 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 EXOC3O60645 756 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 SP9P0CG40 484 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 CSH1P0DML2 217 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 CSH2P0DML3 217 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 HOXD13P35453 343 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 AVPR1AP37288 418 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 GPR15P49685 360 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 PSMC1P62191 440 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 RPL10AP62906 217 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 TNNC1P63316 161 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 CSTF1Q05048 431 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 FAM160A1Q05DH4 1040 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 SDHAF4Q5VUM1 108 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 SASS6Q6UVJ0 657 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 OSTM1Q86WC4 334 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 SCN4BQ8IWT1 228 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 ADSSL1Q8N142 457 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 TTC16Q8NEE8 873 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 TTC8Q8TAM2 541 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 SCFD1Q8WVM8 642 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 FAM3CQ92520 227 aa10.35□□□□□ -0.75
NPLOC4-216ENST00000574344 MRPS31Q92665 395 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms