RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 SPATA32Q96LK8 384 aa22.32■■□□□ 1.16
CHRNB1-204ENST00000572857 FNBP1Q96RU3 617 aa22.32■■□□□ 1.16
CHRNB1-204ENST00000572857 TASP1Q9H6P5 420 aa22.32■■□□□ 1.16
CHRNB1-204ENST00000572857 IL21Q9HBE4 155 aa22.32■■□□□ 1.16
CHRNB1-204ENST00000572857 ZDHHC9Q9Y397 364 aa22.32■■□□□ 1.16
CHRNB1-204ENST00000572857 R4GN57 208 aa22.32■■□□□ 1.16
CHRNB1-204ENST00000572857 A0A1B0GVL5 298 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 SHISA7A6NL88 538 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 MAN2B1O00754 1011 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 ACTN4O43707 911 aaKnown RBP22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 SP9P0CG40 484 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 CYP2F1P24903 491 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 SNRPFP62306 86 aaKnown RBP22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 DDR2Q16832 855 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 CCDC142Q17RM4 750 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 KNOP1Q1ED39 458 aaKnown RBP22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 TRAPPC11Q7Z392 1133 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 MMS19Q96T76 1030 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 TRPV5Q9NQA5 729 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 MAGED2Q9UNF1 606 aaPredicted RBP22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 PIAS3Q9Y6X2 628 aa22.31■■□□□ 1.16
CHRNB1-204ENST00000572857 PTPRZ1P23471 2315 aaPredicted RBP22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 TSC2P49815 1807 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 GABRDO14764 452 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 LAMTOR5O43504 91 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 PFKFB1P16118 471 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 CMA1P23946 247 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 PCSK1P29120 753 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 KRT85P78386 507 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 CYP24A1Q07973 514 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 PSMD6Q15008 389 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 BMT2Q1RMZ1 405 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 SPATA2LQ8IUW3 424 aaPredicted RBP22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 CSGALNACT1Q8TDX6 532 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 FAM3CQ92520 227 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 LRRC3BQ96PB8 259 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 SMG9Q9H0W8 520 aaKnown RBP22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 EXOC1Q9NV70 894 aa22.3■■□□□ 1.16
CHRNB1-204ENST00000572857 MYBPHLA2RUH7 354 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 EXOC3O60645 756 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 ATP2C2O75185 946 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 PRAMEF12O95522 483 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 CST3P01034 146 aaPredicted RBP22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 HMGA1P17096 107 aaKnown RBP22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 LMO2P25791 158 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 RPL10AP62906 217 aaKnown RBP22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 DPH6Q7L8W6 267 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 MAML2Q8IZL2 1156 aaPredicted RBP22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 TTC8Q8TAM2 541 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 SPATA18Q8TC71 538 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 CLDN23Q96B33 292 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 ZFYVE19Q96K21 471 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 PKMYT1Q99640 499 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 CGRRF1Q99675 332 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 SLC46A2Q9BY10 475 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 ABCB6Q9NP58 842 aa22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 CGNQ9P2M7 1197 aaKnown RBP22.29■■□□□ 1.16
CHRNB1-204ENST00000572857 CHADO15335 359 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 KLRC4O43908 158 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 PDGFRBP09619 1106 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 CCNE1P24864 410 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 MAGEA9P43362 315 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 KPNA1P52294 538 aaPredicted RBP22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 NLRP12P59046 1061 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 PSMC1P62191 440 aaKnown RBP22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 FCHO2Q0JRZ9 810 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 STK4Q13043 487 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 KMT5BQ4FZB7 885 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 SCN4BQ8IWT1 228 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 KBTBD7Q8WVZ9 684 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 SYT15Q9BQS2 421 aa22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 RIF1Q5UIP0 2472 aaKnown RBP22.28■■□□□ 1.16
CHRNB1-204ENST00000572857 SLC38A8A6NNN8 435 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 ARNTLO00327 626 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 F11P03951 625 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 CSH1P0DML2 217 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 CSH2P0DML3 217 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 CSTF1Q05048 431 aaKnown RBP22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 FZD5Q13467 585 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 TMEM150AQ86TG1 271 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 MAB21L3Q8N8X9 362 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 ZNF516Q92618 1163 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 USP25Q9UHP3 1055 aa22.27■■□□□ 1.16
CHRNB1-204ENST00000572857 USP34Q70CQ2 3546 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 F5P12259 2224 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 RPS9P46781 194 aaKnown RBP22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 SOX9P48436 509 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 TRPC3Q13507 836 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 ARHGAP29Q52LW3 1261 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 TXNDC8Q6A555 127 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 FAM171BQ6P995 826 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 ZC3H14Q6PJT7 736 aaKnown RBP22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 LIMS2Q7Z4I7 341 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 C12orf56Q8IXR9 622 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 CMTM8Q8IZV2 173 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 ADSSL1Q8N142 457 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 KIAA0895Q8NCT3 520 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 GOLGA5Q8TBA6 731 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 BPIFB1Q8TDL5 484 aa22.26■■□□□ 1.15
CHRNB1-204ENST00000572857 SNX25Q9H3E2 840 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms