RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 AMPHP49418 695 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 NT5C2P49902 561 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 PNLIPRP1P54315 467 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 MLLT6P55198 1093 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 HDAC4P56524 1084 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 GMFBP60983 142 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 COG7P83436 770 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 POU4F1Q01851 419 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 GSTM4Q03013 218 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 GBE1Q04446 702 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 DEUP1Q05D60 604 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 ADAM9Q13443 819 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 IL10RAQ13651 578 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 EPHA7Q15375 998 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 TRADDQ15628 312 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 PCSK7Q16549 785 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 ZNF827Q17R98 1081 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 KIF4BQ2VIQ3 1234 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 LCE2CQ5TA81 110 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 RNF44Q7L0R7 432 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 UBE3BQ7Z3V4 1068 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 MON1AQ86VX9 555 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 NME9Q86XW9 330 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 CCDC105Q8IYK2 499 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 SCML4Q8N228 414 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 LRRC43Q8N309 656 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 AFAP1Q8N556 730 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 GOLGA6L1Q8N7Z2 621 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 C3orf20Q8ND61 904 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 LINS1Q8NG48 757 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 ZNF507Q8TCN5 953 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 NOC3LQ8WTT2 800 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 SEPT1Q8WYJ6 367 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 FAM81BQ96LP2 452 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 LZTS2Q9BRK4 669 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 ZPBPQ9BS86 351 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 NOL10Q9BSC4 688 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 TTPALQ9BTX7 342 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 APOL6Q9BWW8 343 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 MAGEB5Q9BZ81 275 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 REXO4Q9GZR2 422 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 OPA3Q9H6K4 179 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 SMURF1Q9HCE7 757 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 TM9SF3Q9HD45 589 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 DDX4Q9NQI0 724 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 PRDM8Q9NQV8 689 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 SACM1LQ9NTJ5 587 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 EXOC1Q9NV70 894 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 PNPOQ9NVS9 261 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 ANO10Q9NW15 660 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 STK32BQ9NY57 414 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 PLA2G3Q9NZ20 509 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 RGL1Q9NZL6 768 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 MRPL15Q9P015 296 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 DPP7Q9UHL4 492 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 TMEFF2Q9UIK5 374 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 GDF2Q9UK05 429 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 PIN4Q9Y237 131 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 CYP2D7A0A087X1C5 515 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TTC24A2A3L6 582 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ARNTLO00327 626 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 EFSO43281 561 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ANXA1P04083 346 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 LPLP06858 475 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TSPY4P0CV99 314 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TSPY10P0CW01 314 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TYRP14679 529 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RHOQP17081 205 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 GCH1P30793 250 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 CIITAP33076 1130 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 PGM1P36871 562 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 SKIV2L2P42285 1042 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ACAA2P42765 397 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 CAPZA2P47755 286 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 JAM2P57087 298 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RPS3AP61247 264 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RPS16P62249 146 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 MALLQ13021 153 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 NNTQ13423 1086 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TNFAIP1Q13829 316 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 NR0B2Q15466 257 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 GPR19Q15760 415 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 INAQ16352 499 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 SUPT20HL1Q3ZLR7 823 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ZNF805Q5CZA5 627 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 C3orf38Q5JPI3 329 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 CCDC122Q5T0U0 273 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ERMARDQ5T6L9 678 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 UTP14CQ5TAP6 766 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TPGS2Q68CL5 300 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 DRICH1Q6PGQ1 229 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 INO80CQ6PI98 192 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 LRRC8DQ7L1W4 858 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 RABEPKQ7Z6M1 372 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 GPR149Q86SP6 731 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 OSTM1Q86WC4 334 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 TUSC5Q8IXB3 177 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 PEX5LQ8IYB4 626 aa5.37□□□□□ -1.55
TOPBP1-210ENST00000572787 FAM71DQ8N9W8 422 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms