RNA–Protein interactions for RNA: ENST00000572558.5

COX11-204, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

TSL 3

Gene COX11, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-204ENST00000572558 TDP1Q9NUW8 608 aa16.35■□□□□ 0.21
COX11-204ENST00000572558 TMLHEQ9NVH6 421 aa16.35■□□□□ 0.21
COX11-204ENST00000572558 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.35■□□□□ 0.21
COX11-204ENST00000572558 DENND4CQ5VZ89 1909 aa16.35■□□□□ 0.21
COX11-204ENST00000572558 SDK1Q7Z5N4 2213 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 CNOT1A5YKK6 2376 aaKnown RBP16.34■□□□□ 0.21
COX11-204ENST00000572558 CCDC163A0A0D9SF12 145 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 OTOL1A6NHN0 477 aaPredicted RBP16.34■□□□□ 0.21
COX11-204ENST00000572558 TRDMT1O14717 391 aaKnown RBP16.34■□□□□ 0.21
COX11-204ENST00000572558 GDF9O60383 454 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 ATG13O75143 517 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 CSH1P0DML2 217 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 CSH2P0DML3 217 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 BFSP1Q12934 665 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 TRIM68Q6AZZ1 485 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 FSTL4Q6MZW2 842 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 DYMQ7RTS9 669 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 MON1AQ86VX9 555 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 PDCL2Q8N4E4 241 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 GAB3Q8WWW8 586 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 MRPS31Q92665 395 aaKnown RBP16.34■□□□□ 0.21
COX11-204ENST00000572558 CHFRQ96EP1 664 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 EPSTI1Q96J88 318 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 PI4K2AQ9BTU6 479 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 EBF3Q9H4W6 596 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 SEL1LQ9UBV2 794 aa16.34■□□□□ 0.21
COX11-204ENST00000572558 MAP1BP46821 2468 aaKnown RBP16.33■□□□□ 0.2
COX11-204ENST00000572558 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.2
COX11-204ENST00000572558 GPR15P49685 360 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 AMPD2Q01433 879 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 KCNA1Q09470 495 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 ZNF268Q14587 947 aaPredicted RBP16.33■□□□□ 0.2
COX11-204ENST00000572558 TXNDC8Q6A555 127 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 CC2D1AQ6P1N0 951 aaPredicted RBP16.33■□□□□ 0.2
COX11-204ENST00000572558 USP49Q70CQ1 688 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 CACNA2D4Q7Z3S7 1137 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 LEO1Q8WVC0 666 aaPredicted RBP16.33■□□□□ 0.2
COX11-204ENST00000572558 LOXL4Q96JB6 756 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 ACBD6Q9BR61 282 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 FAM213AQ9BRX8 229 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 MRPL44Q9H9J2 332 aaKnown RBP16.33■□□□□ 0.2
COX11-204ENST00000572558 ABCB6Q9NP58 842 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 STK17AQ9UEE5 414 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 L1RE1Q9UN81 338 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 MAGED2Q9UNF1 606 aaPredicted RBP16.33■□□□□ 0.2
COX11-204ENST00000572558 SLC8A2Q9UPR5 921 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 EXOC7Q9UPT5 735 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 ZNF638Q14966 1978 aaKnown RBP16.33■□□□□ 0.2
COX11-204ENST00000572558 SPAG17Q6Q759 2223 aa16.33■□□□□ 0.2
COX11-204ENST00000572558 AXIN1O15169 862 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 HUS1O60921 280 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 RPP40O75818 363 aaKnown RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 ITGB3P05106 788 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 ARSAP15289 507 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 GAP43P17677 238 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 POLR2BP30876 1174 aaKnown RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 RAP1GAPP47736 663 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 PXNP49023 591 aaPredicted RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 WNT7BP56706 349 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 RPL10AP62906 217 aaKnown RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 TFAMQ00059 246 aaKnown RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 PDGFRLQ15198 375 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 L1TD1Q5T7N2 865 aaKnown RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 SDHAF4Q5VUM1 108 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 BRSK2Q8IWQ3 736 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 C1orf127Q8N9H9 656 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 STKLD1Q8NE28 680 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 RIN3Q8TB24 985 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 CACTINQ8WUQ7 758 aaKnown RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 DDX1Q92499 740 aaKnown RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 ACCSQ96QU6 501 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 ARRDC1-AS1Q9H2J1 176 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 DDX43Q9NXZ2 648 aaKnown RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 UXTQ9UBK9 157 aaPredicted RBP16.32■□□□□ 0.2
COX11-204ENST00000572558 CCDC39Q9UFE4 941 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 AGAP1Q9UPQ3 857 aa16.32■□□□□ 0.2
COX11-204ENST00000572558 GREB1Q4ZG55 1949 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 OBSL1O75147 1896 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 RNF40O75150 1001 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 AKAP3O75969 853 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 KRT37O76014 449 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 NOL4O94818 638 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 EPN2O95208 641 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 EGFP01133 1207 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 ZNF806P0C7X5 589 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 DRD1P21728 446 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 CYP2F1P24903 491 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 GALK1P51570 392 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 LIMK1P53667 647 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 MYL7Q01449 175 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 DDR2Q16832 855 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 AASDHQ4L235 1098 aaPredicted RBP16.31■□□□□ 0.2
COX11-204ENST00000572558 INTS6LQ5JSJ4 861 aaKnown RBP16.31■□□□□ 0.2
COX11-204ENST00000572558 KBTBD6Q86V97 674 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 TMEM86AQ8N2M4 240 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 CAMKK1Q8N5S9 505 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 LRRC52Q8N7C0 313 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 ZSWIM2Q8NEG5 633 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 DNAJC19Q96DA6 116 aa16.31■□□□□ 0.2
COX11-204ENST00000572558 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms