RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SLC39A12Q504Y0 691 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 ZCWPW2Q504Y3 356 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 COBLL1Q53SF7 1204 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 DCAF17Q5H9S7 520 aaPredicted RBP8.34□□□□□ -1.07
SMG6-211ENST00000572369 TDRD10Q5VZ19 366 aaKnown RBP8.34□□□□□ -1.07
SMG6-211ENST00000572369 ANKRD40Q6AI12 368 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 IQCEQ6IPM2 695 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 CENPPQ6IPU0 288 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 CLEC17AQ6ZS10 378 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 RTL10Q7L3V2 364 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 GET4Q7L5D6 327 aaPredicted RBP8.34□□□□□ -1.07
SMG6-211ENST00000572369 OTOP3Q7RTS5 596 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 GRASPQ7Z6J2 395 aaPredicted RBP8.34□□□□□ -1.07
SMG6-211ENST00000572369 CCDC105Q8IYK2 499 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 TMEM86AQ8N2M4 240 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 PDCL2Q8N4E4 241 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 TOP6BLQ8N6T0 577 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 TRIML1Q8N9V2 468 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 OR6B3Q8NGW1 331 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 FAM200AQ8TCP9 573 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 NELFBQ8WX92 580 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 ZNF516Q92618 1163 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 ZNF512Q96ME7 567 aaPredicted RBP8.34□□□□□ -1.07
SMG6-211ENST00000572369 TMEM209Q96SK2 561 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 MKNK1Q9BUB5 465 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 SNX25Q9H3E2 840 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 GDAP2Q9NXN4 497 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 DDX43Q9NXZ2 648 aaKnown RBP8.34□□□□□ -1.07
SMG6-211ENST00000572369 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
SMG6-211ENST00000572369 AFF4Q9UHB7 1163 aaKnown RBP8.34□□□□□ -1.07
SMG6-211ENST00000572369 MAFFQ9ULX9 164 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 L1RE1Q9UN81 338 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 CTNND2Q9UQB3 1225 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 INSL5Q9Y5Q6 135 aa8.34□□□□□ -1.07
SMG6-211ENST00000572369 WDFY3Q8IZQ1 3526 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 MTMR11A4FU01 709 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 C2CD4DB7Z1M9 353 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 IKBKBO14920 756 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 SLC16A3O15427 465 aaKnown RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 SEC24AO95486 1093 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 C4BPAP04003 597 aaKnown RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 TRIM49P0CI25 452 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 TRIM49CP0CI26 452 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 P4HA1P13674 534 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 CD44P16070 742 aaKnown RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 PTPN2P17706 415 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 TRIM21P19474 475 aaKnown RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 FSHRP23945 695 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 ACAT1P24752 427 aaKnown RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 PCSK1P29120 753 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 ATICP31939 592 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 GCLMP48507 274 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 EPHB3P54753 998 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 STX17P56962 302 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 LMNB2Q03252 620 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 RING1Q06587 406 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 TWF1Q12792 350 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 DUSP4Q13115 394 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 PAK1Q13153 545 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 PLD1Q13393 1074 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 NCOA4Q13772 614 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 MORC3Q14149 939 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 VEPH1Q14D04 833 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 TPD52L1Q16890 204 aaPredicted RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 SGSM1Q2NKQ1 1148 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 ZNF699Q32M78 642 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 MGAT5BQ3V5L5 792 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 ZNF667Q5HYK9 610 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 SCARA5Q6ZMJ2 495 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 DPH6Q7L8W6 267 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 CREBRFQ8IUR6 639 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 TCEAL8Q8IYN2 117 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 PLCD3Q8N3E9 789 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 OR10T2Q8NGX3 314 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 PLEKHO2Q8TD55 490 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 TMEM174Q8WUU8 243 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 ZNF707Q96C28 371 aaPredicted RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 BORCS6Q96GS4 357 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 SEPT5Q99719 369 aaPredicted RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 CORO1BQ9BR76 489 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 ZCWPW1Q9H0M4 648 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 CLSTN2Q9H4D0 955 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 WDR6Q9NNW5 1121 aaKnown RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 LMBRD1Q9NUN5 540 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 ABI2Q9NYB9 513 aaPredicted RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 ARMCX3Q9UH62 379 aaPredicted RBP8.33□□□□□ -1.08
SMG6-211ENST00000572369 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 TENM4Q6N022 2769 aa8.33□□□□□ -1.08
SMG6-211ENST00000572369 PPP1R3GB7ZBB8 358 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 FGFR1OPO95684 399 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 HLA-DRAP01903 254 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 MYL4P12829 197 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 PMLP29590 882 aa8.32□□□□□ -1.08
SMG6-211ENST00000572369 GNL1P36915 607 aaPredicted RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 TUFMP49411 452 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 PMS1P54277 932 aaKnown RBP8.32□□□□□ -1.08
SMG6-211ENST00000572369 NTHL1P78549 312 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms