RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 WDR72Q3MJ13 1102 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 SLC44A4Q53GD3 710 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 GPR158Q5T848 1215 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 TDRD10Q5VZ19 366 aaKnown RBP19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 SPATA2LQ8IUW3 424 aaPredicted RBP19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 FMR1NBQ8N0W7 255 aaPredicted RBP19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 ERCC4Q92889 916 aaPredicted RBP19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 PKMYT1Q99640 499 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 NCANO14594 1321 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 GALR2O43603 387 aaPredicted RBP19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 KIF20AO95235 890 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 DCNP07585 359 aaKnown RBP19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 PFKPQ01813 784 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 MLF2Q15773 248 aaPredicted RBP19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 VITQ6UXI7 678 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 DPH6Q7L8W6 267 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 SLC9A9Q8IVB4 645 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 SCN4BQ8IWT1 228 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 OR6B3Q8NGW1 331 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 PARD3BQ8TEW8 1205 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 CCDC34Q96HJ3 373 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 GCNAQ96QF7 691 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 PHOX2BQ99453 314 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 TRMT61BQ9BVS5 477 aaKnown RBP19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 SNX25Q9H3E2 840 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 FRMD4BQ9Y2L6 1034 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 MYO10Q9HD67 2058 aa19.04■□□□□ 0.64
CTDNEP1-207ENST00000572043 DOCK6Q96HP0 2047 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 NOTCH4Q99466 2003 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 HEPACAM2A8MVW5 462 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 CD72P21854 359 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 WARSP23381 471 aaKnown RBP19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 NR2F2P24468 414 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 GDI1P31150 447 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 KCNB1Q14721 858 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 ARHGAP15Q53QZ3 475 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 LIMS2Q7Z4I7 341 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 SPATA18Q8TC71 538 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 MYLPFQ96A32 169 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 RSPRY1Q96DX4 576 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 MKNK1Q9BUB5 465 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 GPR88Q9GZN0 384 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 BRD9Q9H8M2 597 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 IL21Q9HBE4 155 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 CRTAC1Q9NQ79 661 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 HEBP1Q9NRV9 189 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 CDH9Q9ULB4 789 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 TRAF3IP3Q9Y228 551 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 NME7Q9Y5B8 376 aa19.03■□□□□ 0.64
CTDNEP1-207ENST00000572043 DOCK8Q8NF50 2099 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 LRRN2O75325 713 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 FGF19O95750 216 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 C4BPAP04003 597 aaKnown RBP19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 CDC25CP30307 473 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 GNL1P36915 607 aaPredicted RBP19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 CYP27A1Q02318 531 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 NCOA4Q13772 614 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 ZNF699Q32M78 642 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 SCARA5Q6ZMJ2 495 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 TPRG1Q6ZUI0 275 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 ALYREFQ86V81 257 aaKnown RBP19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 ARID3BQ8IVW6 561 aaPredicted RBP19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 ATOH1Q92858 354 aaPredicted RBP19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 SYAP1Q96A49 352 aaPredicted RBP19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 SHDQ96IW2 340 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 SMG9Q9H0W8 520 aaKnown RBP19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 XYLT2Q9H1B5 865 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 SMYD3Q9H7B4 428 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 SIT1Q9Y3P8 196 aa19.02■□□□□ 0.64
CTDNEP1-207ENST00000572043 COL4A3Q01955 1670 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 KMT2EQ8IZD2 1858 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 AKAP3O75969 853 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 VNN1O95497 513 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 HMGA1P17096 107 aaKnown RBP19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 PSMC3P17980 439 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 ATICP31939 592 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 RAP1GAPP47736 663 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 CDH8P55286 799 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 STARD6P59095 220 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 RPL10AP62906 217 aaKnown RBP19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 UBXN2BQ14CS0 331 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 MDH1BQ5I0G3 518 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 PHLDB3Q6NSJ2 640 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 FAM171BQ6P995 826 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 YAF2Q8IY57 180 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 GUF1Q8N442 669 aaKnown RBP19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 DTWD2Q8NBA8 298 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 ENGASEQ8NFI3 743 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 EEF2KMTQ96G04 330 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 DPEP3Q9H4B8 488 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 MMRN2Q9H8L6 949 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 ABCB6Q9NP58 842 aa19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 MAGEC2Q9UBF1 373 aaPredicted RBP19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 MTF2Q9Y483 593 aaPredicted RBP19.01■□□□□ 0.63
CTDNEP1-207ENST00000572043 KANSL1LA0AUZ9 987 aa19■□□□□ 0.63
CTDNEP1-207ENST00000572043 SLC38A8A6NNN8 435 aa19■□□□□ 0.63
CTDNEP1-207ENST00000572043 A8MXQ7 604 aa19■□□□□ 0.63
CTDNEP1-207ENST00000572043 DPYSL4O14531 572 aa19■□□□□ 0.63
CTDNEP1-207ENST00000572043 ZNF263O14978 683 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms