RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 KRT19P08727 400 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 POU2F2P09086 479 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 PSMC2P35998 433 aaKnown RBP14.32□□□□□ -0.12
CCDC40-205ENST00000571028 FKBP3Q00688 224 aaKnown RBP14.32□□□□□ -0.12
CCDC40-205ENST00000571028 LRRC63Q05C16 580 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 ELAVL2Q12926 359 aaKnown RBP14.32□□□□□ -0.12
CCDC40-205ENST00000571028 PSMD6Q15008 389 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 SKOR2Q2VWA4 1001 aaPredicted RBP14.32□□□□□ -0.12
CCDC40-205ENST00000571028 UVSSAQ2YD98 709 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 PLEKHO2Q8TD55 490 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 CACTINQ8WUQ7 758 aaKnown RBP14.32□□□□□ -0.12
CCDC40-205ENST00000571028 ELSPBP1Q96BH3 223 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 DUSP9Q99956 384 aaKnown RBP14.32□□□□□ -0.12
CCDC40-205ENST00000571028 MTMR12Q9C0I1 747 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 DNMT3BQ9UBC3 853 aaKnown RBP14.32□□□□□ -0.12
CCDC40-205ENST00000571028 DACH1Q9UI36 760 aa14.32□□□□□ -0.12
CCDC40-205ENST00000571028 I3L4J1 428 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 PPEF2O14830 753 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 GDF9O60383 454 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 PHACTR2O75167 634 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 TNNC2P02585 160 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 EPB41P11171 864 aaKnown RBP14.31□□□□□ -0.12
CCDC40-205ENST00000571028 KRT13P13646 458 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 BRCC3P46736 316 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 CXCL12P48061 93 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 DLG4P78352 724 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 MYBPC2Q14324 1141 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 SURF1Q15526 300 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 ZBTB6Q15916 424 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 CCDC40Q4G0X9 1142 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 SPATA1Q5VX52 437 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 TTI2Q6NXR4 508 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 RBM43Q6ZSC3 357 aaKnown RBP14.31□□□□□ -0.12
CCDC40-205ENST00000571028 CEP68Q76N32 757 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 CSGALNACT2Q8N6G5 542 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 C12orf50Q8NA57 414 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-205ENST00000571028 OR5B17Q8NGF7 314 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 LNX1Q8TBB1 728 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-205ENST00000571028 FAM3CQ92520 227 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 IRF7Q92985 503 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 DDX27Q96GQ7 796 aaKnown RBP14.31□□□□□ -0.12
CCDC40-205ENST00000571028 ANKRD36BP1Q96IX9 119 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 UROC1Q96N76 676 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 CGRRF1Q99675 332 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 TRMT61BQ9BVS5 477 aaKnown RBP14.31□□□□□ -0.12
CCDC40-205ENST00000571028 SRRTQ9BXP5 876 aaKnown RBP14.31□□□□□ -0.12
CCDC40-205ENST00000571028 GZF1Q9H116 711 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-205ENST00000571028 LMAN1LQ9HAT1 526 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 DPP3Q9NY33 737 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 RWDD2AQ9UIY3 292 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 DERAQ9Y315 318 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 NUB1Q9Y5A7 615 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 PTPRJQ12913 1337 aa14.31□□□□□ -0.12
CCDC40-205ENST00000571028 SYCE3A1L190 88 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 LRG1P02750 347 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 RHOP08100 348 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 TRIM49P0CI25 452 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 TRIM49CP0CI26 452 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 TDGF1P13385 188 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 CNR2P34972 360 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 OR1D2P34982 312 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 VAMP7P51809 220 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 POU5F1Q01860 360 aaKnown RBP14.3□□□□□ -0.12
CCDC40-205ENST00000571028 TYRO3Q06418 890 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 FZD5Q13467 585 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 BIRC3Q13489 604 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 GRM2Q14416 872 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 STX1AQ16623 288 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 NFIL3Q16649 462 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 UPP1Q16831 310 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 TCERG1LQ5VWI1 586 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 SCARA3Q6AZY7 606 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 TANGO2Q6ICL3 276 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 MAMSTRQ6ZN01 415 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 C11orf57Q6ZUT1 292 aaPredicted RBP14.3□□□□□ -0.12
CCDC40-205ENST00000571028 RTL10Q7L3V2 364 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 PLA2G2FQ9BZM2 168 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 ZFP14Q9HCL3 533 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 INTS13Q9NVM9 706 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 ANO10Q9NW15 660 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 AGAP1Q9UPQ3 857 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 R3HCC1Q9Y3T6 440 aaKnown RBP14.3□□□□□ -0.12
CCDC40-205ENST00000571028 C2CD2Q9Y426 696 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 PIAS3Q9Y6X2 628 aa14.3□□□□□ -0.12
CCDC40-205ENST00000571028 LRRIQ3A6PVS8 624 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-205ENST00000571028 CHURC1-FNTBB4DL54 471 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 ADAM12O43184 909 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 ITGB3P05106 788 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 CEBPBP17676 345 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 CYP3A5P20815 502 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 PMLP29590 882 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 POLR2BP30876 1174 aaKnown RBP14.29□□□□□ -0.12
CCDC40-205ENST00000571028 RPL9P32969 192 aaKnown RBP14.29□□□□□ -0.12
CCDC40-205ENST00000571028 FNTBP49356 437 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 SHC2P98077 582 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 SATB1Q01826 763 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 BFSP1Q12934 665 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 RAB33AQ14088 237 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 DUOXA2Q1HG44 320 aa14.29□□□□□ -0.12
CCDC40-205ENST00000571028 HSP90AA4PQ58FG1 418 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms