RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
CDH3-210ENST00000569117 KRT9P35527 623 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 STAT1P42224 750 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 LHX1P48742 406 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 CDH8P55286 799 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 KRT17Q04695 432 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 UBE3AQ05086 875 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 USP41Q3LFD5 358 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 LRIT3Q3SXY7 679 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 RTP2Q5QGT7 225 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
CDH3-210ENST00000569117 E4F1Q66K89 784 aaPredicted RBP11.13□□□□□ -0.63
CDH3-210ENST00000569117 OVOS1Q6IE37 1185 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 SPRED2Q7Z698 418 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 METTL23Q86XA0 190 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 GPR65Q8IYL9 337 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 KLHL23Q8NBE8 558 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 SPC24Q8NBT2 197 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 RBBP8NLQ8NC74 664 aaPredicted RBP11.13□□□□□ -0.63
CDH3-210ENST00000569117 WHAMMQ8TF30 809 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 PIK3R5Q8WYR1 880 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 SYN2Q92777 582 aaPredicted RBP11.13□□□□□ -0.63
CDH3-210ENST00000569117 TWNKQ96RR1 684 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 C11orf84Q9BUA3 381 aaPredicted RBP11.13□□□□□ -0.63
CDH3-210ENST00000569117 NKX2-4Q9H2Z4 354 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 CHST7Q9NS84 486 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 ABHD10Q9NUJ1 306 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 HMGXB4Q9UGU5 601 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
CDH3-210ENST00000569117 STXBP5LQ9Y2K9 1186 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 NME7Q9Y5B8 376 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 PCDHB4Q9Y5E5 795 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 TIMM13Q9Y5L4 95 aaPredicted RBP11.13□□□□□ -0.63
CDH3-210ENST00000569117 PATJQ8NI35 1801 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 CHD7Q9P2D1 2997 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 A8MXQ7 604 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 AKR1B15C9JRZ8 316 aaPredicted RBP11.12□□□□□ -0.63
CDH3-210ENST00000569117 FOXN3O00409 490 aaPredicted RBP11.12□□□□□ -0.63
CDH3-210ENST00000569117 PAEPP09466 180 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 KRT5P13647 590 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 FERP16591 822 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 PCSK1P29120 753 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 GLUD2P49448 558 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 NDST1P52848 882 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 RAD23BP54727 409 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 GSDMDP57764 484 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 DSG1Q02413 1049 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 CCDC173Q0VFZ6 552 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 MRPL58Q14197 206 aaKnown RBP11.12□□□□□ -0.63
CDH3-210ENST00000569117 SFMBT2Q5VUG0 894 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 ZNF280DQ6N043 979 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 ANKS3Q6ZW76 656 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 TC2NQ8N9U0 490 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 OR6B3Q8NGW1 331 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 CPLX3Q8WVH0 158 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 B3GALT6Q96L58 329 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 RTP3Q9BQQ7 232 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 NT5C1AQ9BXI3 368 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 OXCT2Q9BYC2 517 aaPredicted RBP11.12□□□□□ -0.63
CDH3-210ENST00000569117 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 ZBP1Q9H171 429 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 DDX43Q9NXZ2 648 aaKnown RBP11.12□□□□□ -0.63
CDH3-210ENST00000569117 AIPL1Q9NZN9 384 aa11.12□□□□□ -0.63
CDH3-210ENST00000569117 HCRTO43612 131 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 TBC1D4O60343 1298 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 GFPT2O94808 682 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 URODP06132 367 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 CCDC172P0C7W6 258 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 CTSAP10619 480 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
CDH3-210ENST00000569117 USP8P40818 1118 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 PRKCIP41743 596 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 PDE6CP51160 858 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 ADKP55263 362 aaKnown RBP11.11□□□□□ -0.63
CDH3-210ENST00000569117 ASIC2Q16515 512 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 MEA1Q16626 185 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 TAS1R1Q7RTX1 841 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 CRYBG2Q8N1P7 616 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 THEM5Q8N1Q8 247 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 SLC4A11Q8NBS3 891 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 B3GALNT2Q8NCR0 500 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 OR8K1Q8NGG5 319 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 OR10T2Q8NGX3 314 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 TIFAQ96CG3 184 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 TMEM176AQ96HP8 235 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 TNIP3Q96KP6 325 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 PANX2Q96RD6 677 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 PPP1R9BQ96SB3 815 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 PKMYT1Q99640 499 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 SYT15Q9BQS2 421 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 ACBD6Q9BR61 282 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
CDH3-210ENST00000569117 SLC28A3Q9HAS3 691 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms