RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 RAB34Q9BZG1 259 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 C17orf75Q9HAS0 396 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 TRPC7Q9HCX4 862 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 ZDHHC4Q9NPG8 344 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 OBP2AQ9NY56 170 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 ASB3Q9Y575 518 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 CACNA1EQ15878 2313 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 NUP205Q92621 2012 aa16.06■□□□□ 0.16
USB1-214ENST00000568848 A0A0B4J269 797 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 ANO9A1A5B4 782 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 CDC25CP30307 473 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 GJA4P35212 333 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 NOVA1P51513 510 aaKnown RBP16.05■□□□□ 0.16
USB1-214ENST00000568848 SEC13P55735 322 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 BFSP1Q12934 665 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 MCM6Q14566 821 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 HYIQ5T013 277 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 KIAA1211LQ6NV74 962 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 FIZ1Q96SL8 496 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
USB1-214ENST00000568848 PKD1L2Q7Z442 2459 aa16.05■□□□□ 0.16
USB1-214ENST00000568848 GON4LQ3T8J9 2241 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 THADAQ6YHU6 1953 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 LNP1A1A4G5 178 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 TRDMT1O14717 391 aaKnown RBP16.04■□□□□ 0.16
USB1-214ENST00000568848 CYP11A1P05108 521 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 ADRB2P07550 413 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 GBP1P32455 592 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 AVPR1AP37288 418 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 ATP2C1P98194 919 aaPredicted RBP16.04■□□□□ 0.16
USB1-214ENST00000568848 COL9A2Q14055 689 aaPredicted RBP16.04■□□□□ 0.16
USB1-214ENST00000568848 C1orf228Q6PIY5 440 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 OSTM1Q86WC4 334 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 TTC30AQ86WT1 665 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 SYNPOQ8N3V7 929 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 FRMD1Q8N878 549 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 BLOC1S4Q9NUP1 217 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 THG1LQ9NWX6 298 aaKnown RBP16.04■□□□□ 0.16
USB1-214ENST00000568848 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 ZMIZ1Q9ULJ6 1067 aa16.04■□□□□ 0.16
USB1-214ENST00000568848 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
USB1-214ENST00000568848 FAM13AO94988 1023 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 PIGRP01833 764 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 HNRNPLP14866 589 aaKnown RBP eCLIP16.03■□□□□ 0.16
USB1-214ENST00000568848 CYP2F1P24903 491 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 PRPHP41219 470 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 TUFMP49411 452 aaKnown RBP16.03■□□□□ 0.16
USB1-214ENST00000568848 SHC2P98077 582 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 ZNF252P-AS1Q0IIN9 211 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 MESP2Q0VG99 397 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 DMC1Q14565 340 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 KARSQ15046 597 aaKnown RBP16.03■□□□□ 0.16
USB1-214ENST00000568848 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 KIF2CQ99661 725 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 P2RY13Q9BPV8 354 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 TIPINQ9BVW5 301 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 LINC00597Q9H2U6 94 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 TDP1Q9NUW8 608 aa16.03■□□□□ 0.16
USB1-214ENST00000568848 ASCC3Q8N3C0 2202 aaKnown RBP16.03■□□□□ 0.16
USB1-214ENST00000568848 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 C2orf78A6NCI8 922 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 XPOTO43592 962 aaKnown RBP16.02■□□□□ 0.16
USB1-214ENST00000568848 FGF19O95750 216 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 CAVIN2O95810 425 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 PROS1P07225 676 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 TAF6P49848 677 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 DGKEP52429 567 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 HMGN5P82970 282 aaKnown RBP16.02■□□□□ 0.16
USB1-214ENST00000568848 KCNA1Q09470 495 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 MTF1Q14872 753 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 SH3PXD2AQ5TCZ1 1133 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 ADALQ6DHV7 355 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 CRELD2Q6UXH1 353 aaPredicted RBP16.02■□□□□ 0.16
USB1-214ENST00000568848 UNQ6494/PRO21346Q6UXR6 183 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 METTL23Q86XA0 190 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 CCDC33Q8N5R6 958 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 DDX1Q92499 740 aaKnown RBP16.02■□□□□ 0.16
USB1-214ENST00000568848 LOXL4Q96JB6 756 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 ZC3H10Q96K80 434 aaKnown RBP16.02■□□□□ 0.16
USB1-214ENST00000568848 OXCT2Q9BYC2 517 aaPredicted RBP16.02■□□□□ 0.16
USB1-214ENST00000568848 ECT2Q9H8V3 914 aa16.02■□□□□ 0.16
USB1-214ENST00000568848 LARSQ9P2J5 1176 aaKnown RBP16.02■□□□□ 0.16
USB1-214ENST00000568848 ATXN2Q99700 1313 aaKnown RBP16.01■□□□□ 0.15
USB1-214ENST00000568848 TRAK2O60296 914 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 PLCG1P19174 1290 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 WEE1P30291 646 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 POLR2BP30876 1174 aaKnown RBP16.01■□□□□ 0.15
USB1-214ENST00000568848 ZXDBP98169 803 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 ZNF77Q15935 545 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 UAP1L1Q3KQV9 507 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 C2orf27AQ580R0 203 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 ANO7Q6IWH7 933 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 CC2D1AQ6P1N0 951 aaPredicted RBP16.01■□□□□ 0.15
USB1-214ENST00000568848 MON1AQ86VX9 555 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 PDCL2Q8N4E4 241 aa16.01■□□□□ 0.15
USB1-214ENST00000568848 ARL14EPQ8N8R7 260 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms