RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 E2F7Q96AV8 911 aa31.5■■■□□ 2.63
RAB40C-211ENST00000568586 FUBP3Q96I24 572 aaKnown RBP eCLIP31.5■■■□□ 2.63
RAB40C-211ENST00000568586 VRTNQ9H8Y1 702 aa31.5■■■□□ 2.63
RAB40C-211ENST00000568586 GTF3C4Q9UKN8 822 aa31.5■■■□□ 2.63
RAB40C-211ENST00000568586 ATICP31939 592 aa31.49■■■□□ 2.63
RAB40C-211ENST00000568586 ENGASEQ8NFI3 743 aa31.49■■■□□ 2.63
RAB40C-211ENST00000568586 CCDC34Q96HJ3 373 aa31.49■■■□□ 2.63
RAB40C-211ENST00000568586 TRPV5Q9NQA5 729 aa31.49■■■□□ 2.63
RAB40C-211ENST00000568586 CDH9Q9ULB4 789 aa31.49■■■□□ 2.63
RAB40C-211ENST00000568586 LRRIQ3A6PVS8 624 aaPredicted RBP31.48■■■□□ 2.63
RAB40C-211ENST00000568586 MAPK13O15264 365 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 HMGA1P17096 107 aaKnown RBP31.48■■■□□ 2.63
RAB40C-211ENST00000568586 LMO2P25791 158 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 GABRR2P28476 465 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 CASP4P49662 377 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 CDR1P51861 262 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 SNW1Q13573 536 aaKnown RBP31.48■■■□□ 2.63
RAB40C-211ENST00000568586 CCDC105Q8IYK2 499 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 TMC2Q8TDI7 906 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 DNASE1L2Q92874 299 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 PI4K2AQ9BTU6 479 aa31.48■■■□□ 2.63
RAB40C-211ENST00000568586 MYBPHLA2RUH7 354 aa31.47■■■□□ 2.63
RAB40C-211ENST00000568586 HCRTO43612 131 aa31.47■■■□□ 2.63
RAB40C-211ENST00000568586 C4BPAP04003 597 aaKnown RBP31.47■■■□□ 2.63
RAB40C-211ENST00000568586 PSMC3P17980 439 aa31.47■■■□□ 2.63
RAB40C-211ENST00000568586 MLF2Q15773 248 aaPredicted RBP31.47■■■□□ 2.63
RAB40C-211ENST00000568586 VITQ6UXI7 678 aa31.47■■■□□ 2.63
RAB40C-211ENST00000568586 FAM200AQ8TCP9 573 aa31.47■■■□□ 2.63
RAB40C-211ENST00000568586 DEPDC1BQ8WUY9 529 aa31.47■■■□□ 2.63
RAB40C-211ENST00000568586 TRMT61BQ9BVS5 477 aaKnown RBP31.47■■■□□ 2.63
RAB40C-211ENST00000568586 ATXN3LQ9H3M9 355 aa31.47■■■□□ 2.63
RAB40C-211ENST00000568586 CALUO43852 315 aaPredicted RBP31.46■■■□□ 2.63
RAB40C-211ENST00000568586 CDC25CP30307 473 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 VIPR2P41587 438 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 MAGEA11P43364 429 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 MCCD1P59942 119 aaPredicted RBP31.46■■■□□ 2.63
RAB40C-211ENST00000568586 MYL6P60660 151 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 RPL10AP62906 217 aaKnown RBP31.46■■■□□ 2.63
RAB40C-211ENST00000568586 WDR72Q3MJ13 1102 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 TDRD10Q5VZ19 366 aaKnown RBP31.46■■■□□ 2.63
RAB40C-211ENST00000568586 MFSD6LQ8IWD5 586 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 GIPC2Q8TF65 315 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 SYAP1Q96A49 352 aaPredicted RBP31.46■■■□□ 2.63
RAB40C-211ENST00000568586 SYT15Q9BQS2 421 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 DLGAP2Q9P1A6 1054 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 ZMYM5Q9UJ78 669 aa31.46■■■□□ 2.63
RAB40C-211ENST00000568586 IKBKBO14920 756 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 CYP2F1P24903 491 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 TRPC3Q13507 836 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 CCDC142Q17RM4 750 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 STXBP5Q5T5C0 1151 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 TMEM150AQ86TG1 271 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 DTWD2Q8NBA8 298 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 MMS19Q96T76 1030 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 OSBPL6Q9BZF3 934 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 SLITRK6Q9H5Y7 841 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 TASP1Q9H6P5 420 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 CRTAC1Q9NQ79 661 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 SIT1Q9Y3P8 196 aa31.45■■■□□ 2.63
RAB40C-211ENST00000568586 NCANO14594 1321 aa31.45■■■□□ 2.62
RAB40C-211ENST00000568586 SOBPA7XYQ1 873 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 ATP2C2O75185 946 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 F11P03951 625 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 CSH1P0DML2 217 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 CSH2P0DML3 217 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 ENPEPQ07075 957 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 MAPRE1Q15691 268 aaKnown RBP31.44■■■□□ 2.62
RAB40C-211ENST00000568586 ZCWPW2Q504Y3 356 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 ARHGAP15Q53QZ3 475 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 SPATA2LQ8IUW3 424 aaPredicted RBP31.44■■■□□ 2.62
RAB40C-211ENST00000568586 ARID3BQ8IVW6 561 aaPredicted RBP31.44■■■□□ 2.62
RAB40C-211ENST00000568586 PJA1Q8NG27 643 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 RSPRY1Q96DX4 576 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 MYRFLQ96LU7 910 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 MRPL45Q9BRJ2 306 aaKnown RBP31.44■■■□□ 2.62
RAB40C-211ENST00000568586 OBP2AQ9NY56 170 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 NME7Q9Y5B8 376 aa31.44■■■□□ 2.62
RAB40C-211ENST00000568586 KANSL1LA0AUZ9 987 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 GOLGA6L4A6NEF3 574 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 STK25O00506 426 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 NOL4O94818 638 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 GNL1P36915 607 aaPredicted RBP31.43■■■□□ 2.62
RAB40C-211ENST00000568586 GPR15P49685 360 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 DLG4P78352 724 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 FAM160A1Q05DH4 1040 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 FCHO2Q0JRZ9 810 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 TAF12Q16514 161 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 ZACNQ401N2 412 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 C1orf220Q5T0J3 134 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 C4orf50Q6ZRC1 276 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 SPATA20Q8TB22 786 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 IRF7Q92985 503 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 TRMT2BQ96GJ1 504 aaKnown RBP31.43■■■□□ 2.62
RAB40C-211ENST00000568586 CEP295NLQ96MC4 621 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 TIGD1Q96MW7 591 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 FRMD4BQ9Y2L6 1034 aa31.43■■■□□ 2.62
RAB40C-211ENST00000568586 SHISA7A6NL88 538 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 HEPACAM2A8MVW5 462 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 ARNTLO00327 626 aa31.42■■■□□ 2.62
RAB40C-211ENST00000568586 VNN1O95497 513 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms