RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PSMD10O75832 226 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 MARCKSP29966 332 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 ACTN2P35609 894 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 IFNAR2P48551 515 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 KCNH2Q12809 1159 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 VEPH1Q14D04 833 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 HSF5Q4G112 596 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 EOGTQ5NDL2 527 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 NAIF1Q69YI7 327 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 DNAJB7Q7Z6W7 309 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 HSCBQ8IWL3 235 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 SPACA3Q8IXA5 215 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 CCDC12Q8WUD4 166 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 EZH1Q92800 747 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 TMEM176AQ96HP8 235 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 PRIMPOLQ96LW4 560 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 HSPA12BQ96MM6 686 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 OXCT2Q9BYC2 517 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 NFKBIZQ9BYH8 718 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 DNAJC25Q9H1X3 360 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 TM7SF3Q9NS93 570 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 TDP1Q9NUW8 608 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 RBM28Q9NW13 759 aaKnown RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 SEPT3Q9UH03 358 aa10.59□□□□□ -0.71
CAPN3-216ENST00000567071 USP9YO00507 2555 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-216ENST00000567071 CNTNAP5Q8WYK1 1306 aa10.58□□□□□ -0.71
CAPN3-216ENST00000567071 TRIP11Q15643 1979 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 TCRBV21S2A2A0A5A6 115 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 MATKP42679 507 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 EXOSC10Q01780 885 aaKnown RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 DUSP4Q13115 394 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 TOB2Q14106 344 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 MRPL58Q14197 206 aaKnown RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 XKR9Q5GH70 373 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 GLRA4Q5JXX5 417 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 WDR45BQ5MNZ6 344 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 C6orf132Q5T0Z8 1188 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 ARHGAP40Q5TG30 622 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 IL27RAQ6UWB1 636 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 DHRS13Q6UX07 377 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 TMEM92Q6UXU6 159 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 MICU3Q86XE3 530 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 RAB11FIP4Q86YS3 637 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 ZNF513Q8N8E2 541 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 TRIML1Q8N9V2 468 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 C3orf58Q8NDZ4 430 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 BAHD1Q8TBE0 780 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 BICD2Q8TD16 824 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 FOXJ1Q92949 421 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 BRF1Q92994 677 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 TMEM87BQ96K49 555 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 PPP1R10Q96QC0 940 aaKnown RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 GAREM1Q9H706 876 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 GOLGA2P5Q9HBQ8 144 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 SLC38A7Q9NVC3 462 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 PRMT7Q9NVM4 692 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 DUS2Q9NX74 493 aaKnown RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 GDAQ9Y2T3 454 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 V9GY48 417 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-216ENST00000567071 CABIN1Q9Y6J0 2220 aa10.58□□□□□ -0.72
CAPN3-216ENST00000567071 SPTBN1Q01082 2364 aaKnown RBP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 PODXLO00592 558 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 SH2B2O14492 632 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 NDUFS2O75306 463 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 KLF8O95600 359 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 IGFBP6P24592 240 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 DDX6P26196 483 aaKnown RBP eCLIP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 GNA11P29992 359 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 USP11P51784 963 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 CAPSQ13938 189 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 BECN1Q14457 450 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 CD300LGQ6UXG3 332 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 ATG14Q6ZNE5 492 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 APBB1IPQ7Z5R6 666 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 TXNDC5Q8NBS9 432 aaKnown RBP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 TTC16Q8NEE8 873 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 SNX21Q969T3 373 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 CCDC43Q96MW1 224 aaKnown RBP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 PGLYRP2Q96PD5 576 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 NRSN2Q9GZP1 204 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 NAP1L2Q9ULW6 460 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-216ENST00000567071 PCDHGB2Q9Y5G2 931 aa10.57□□□□□ -0.72
CAPN3-216ENST00000567071 A0A1B0GTW7 788 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 ESYT2A0FGR8 921 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 K7ELQ4 463 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-216ENST00000567071 K7EQS6 105 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-216ENST00000567071 CILPO75339 1184 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 ZNF217O75362 1048 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 LARGE1O95461 756 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 P4HBP07237 508 aaKnown RBP10.56□□□□□ -0.72
CAPN3-216ENST00000567071 CDK4P11802 303 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 YWHABP31946 246 aaKnown RBP10.56□□□□□ -0.72
CAPN3-216ENST00000567071 MCM4P33991 863 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 LIFRP42702 1097 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 SCRN1Q12765 414 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 UBAP2LQ14157 1087 aaKnown RBP10.56□□□□□ -0.72
CAPN3-216ENST00000567071 MTF1Q14872 753 aa10.56□□□□□ -0.72
CAPN3-216ENST00000567071 RTP5Q14D33 572 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms