RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 NXF1Q9UBU9 619 aaKnown RBP17.86■□□□□ 0.45
CLN6-208ENST00000567060 FBXL5Q9UKA1 691 aa17.86■□□□□ 0.45
CLN6-208ENST00000567060 LGALS16A8MUM7 142 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 HIDE1A8MVS5 230 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 C2CD2LO14523 706 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 TEX28O15482 410 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 KLRC2P26717 231 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 ASPAP45381 313 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 TSPY1Q01534 308 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 INCA1Q0VD86 236 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 HSP90AA4PQ58FG1 418 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 ANKRD54Q6NXT1 300 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 DCP1BQ8IZD4 617 aaKnown RBP17.85■□□□□ 0.45
CLN6-208ENST00000567060 C2orf15Q8WU43 125 aaKnown RBP17.85■□□□□ 0.45
CLN6-208ENST00000567060 CLSTN3Q9BQT9 956 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 SNX25Q9H3E2 840 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 TAB2Q9NYJ8 693 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 CDH9Q9ULB4 789 aa17.85■□□□□ 0.45
CLN6-208ENST00000567060 PROB1E7EW31 1015 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 PES1O00541 588 aaKnown RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 CA8P35219 290 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 GNL1P36915 607 aaPredicted RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 NFE2Q16621 373 aaPredicted RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 SCARA3Q6AZY7 606 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 TRIM65Q6PJ69 517 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 PRSS55Q6UWB4 352 aaPredicted RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 APTXQ7Z2E3 356 aaKnown RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 ZNF461Q8TAF7 563 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 KBTBD7Q8WVZ9 684 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 TNIP3Q96KP6 325 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 B3GALT6Q96L58 329 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 PI4K2AQ9BTU6 479 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 APOL5Q9BWW9 433 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 INTS2Q9H0H0 1204 aaKnown RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 IRF2BPLQ9H1B7 796 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 PLEKHA4Q9H4M7 779 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 APOBEC3GQ9HC16 384 aaKnown RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 DDX43Q9NXZ2 648 aaKnown RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 CDH22Q9UJ99 828 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 TIMM13Q9Y5L4 95 aaPredicted RBP17.84■□□□□ 0.45
CLN6-208ENST00000567060 MYO10Q9HD67 2058 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 PLXNA3P51805 1871 aa17.84■□□□□ 0.45
CLN6-208ENST00000567060 CLASP2O75122 1294 aaKnown RBP17.83■□□□□ 0.44
CLN6-208ENST00000567060 GLUD1P00367 558 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 TPM3P06753 285 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 SP100P23497 879 aaPredicted RBP17.83■□□□□ 0.44
CLN6-208ENST00000567060 OR1D2P34982 312 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 CLCN4P51793 760 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 GPR17Q13304 367 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 CUL2Q13617 745 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 UVSSAQ2YD98 709 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 ASCL5Q7RTU5 278 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 OR6B3Q8NGW1 331 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 AUTS2Q8WXX7 1259 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 CASP10Q92851 521 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 ERGIC2Q96RQ1 377 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 ZCWPW1Q9H0M4 648 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 VPS16Q9H269 839 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 PLCB1Q9NQ66 1216 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 DZANK1Q9NVP4 752 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 APEX2Q9UBZ4 518 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 AFF4Q9UHB7 1163 aaKnown RBP17.83■□□□□ 0.44
CLN6-208ENST00000567060 CDY1Q9Y6F8 540 aa17.83■□□□□ 0.44
CLN6-208ENST00000567060 A0A1B0GTH6 734 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 ABLIM3O94929 683 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 SERPINC1P01008 464 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 ATP1A3P13637 1013 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 ATF2P15336 505 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 PON1P27169 355 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 NUBP1P53384 320 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 MFAP3P55082 362 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 ROR1Q01973 937 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 INTS6LQ5JSJ4 861 aaKnown RBP17.82■□□□□ 0.44
CLN6-208ENST00000567060 SPOPLQ6IQ16 392 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 LLGL2Q6P1M3 1020 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 LILRA6Q6PI73 481 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 KREMEN2Q8NCW0 462 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 SLC22A17Q8WUG5 538 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 SMYD3Q9H7B4 428 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 RTN4Q9NQC3 1192 aaKnown RBP17.82■□□□□ 0.44
CLN6-208ENST00000567060 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
CLN6-208ENST00000567060 MTCL1Q9Y4B5 1905 aaKnown RBP17.82■□□□□ 0.44
CLN6-208ENST00000567060 A0A1W2PQC6 194 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 GALR2O43603 387 aaPredicted RBP17.81■□□□□ 0.44
CLN6-208ENST00000567060 CILPO75339 1184 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 CPB1P15086 417 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 HOXB8P17481 243 aaPredicted RBP17.81■□□□□ 0.44
CLN6-208ENST00000567060 UBXN1Q04323 297 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 FAM171BQ6P995 826 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 CYP26C1Q6V0L0 522 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 CCDC149Q6ZUS6 474 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 CRYBG2Q8N1P7 616 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 PPM1KQ8N3J5 372 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 SPPL2BQ8TCT7 592 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 TATDN2Q93075 761 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 FUBP3Q96I24 572 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLN6-208ENST00000567060 RTP3Q9BQQ7 232 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 SYT15Q9BQS2 421 aa17.81■□□□□ 0.44
CLN6-208ENST00000567060 MRPL45Q9BRJ2 306 aaKnown RBP17.81■□□□□ 0.44
CLN6-208ENST00000567060 NT5C1AQ9BXI3 368 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms