RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CYP4X1Q8N118 509 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 ANKRD42Q8N9B4 389 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 ZNF606Q8WXB4 792 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 NKD2Q969F2 451 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-213ENST00000566756 FRMD8P1Q9BZ68 369 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-213ENST00000566756 IMPG2Q9BZV3 1241 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 EFR3BQ9Y2G0 817 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 NUB1Q9Y5A7 615 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 CFHP08603 1231 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 TXNP10599 105 aaKnown RBP17.68■□□□□ 0.42
CMTM3-213ENST00000566756 ALADP13716 330 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 NQO1P15559 274 aaKnown RBP17.68■□□□□ 0.42
CMTM3-213ENST00000566756 CD58P19256 250 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 CDH5P33151 784 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-213ENST00000566756 SLC26A2P50443 739 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 NCOA4Q13772 614 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 PIGHQ14442 188 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-213ENST00000566756 HSDL1Q3SXM5 330 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 TMEM63BQ5T3F8 832 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 ASAP3Q8TDY4 903 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 NOD2Q9HC29 1040 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 FETUBQ9UGM5 382 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 SHOC2Q9UQ13 582 aa17.68■□□□□ 0.42
CMTM3-213ENST00000566756 NOP56O00567 594 aaKnown RBP17.67■□□□□ 0.42
CMTM3-213ENST00000566756 ASS1P00966 412 aaKnown RBP17.67■□□□□ 0.42
CMTM3-213ENST00000566756 ITGAVP06756 1048 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 VPS41P49754 854 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 C2CD6Q53TS8 623 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 FAM133BQ5BKY9 247 aaKnown RBP17.67■□□□□ 0.42
CMTM3-213ENST00000566756 TAPT1Q6NXT6 567 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 PLEKHH3Q7Z736 793 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 PHLDB2Q86SQ0 1253 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 TRABD2AQ86V40 505 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 WDR49Q8IV35 697 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 PASD1Q8IV76 773 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 BRSK2Q8IWQ3 736 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 SRRM1Q8IYB3 904 aaKnown RBP17.67■□□□□ 0.42
CMTM3-213ENST00000566756 SLC7A3Q8WY07 619 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 DNAJC17Q9NVM6 304 aaKnown RBP17.67■□□□□ 0.42
CMTM3-213ENST00000566756 KLHL14Q9P2G3 628 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 MCM8Q9UJA3 840 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
CMTM3-213ENST00000566756 SMG5Q9UPR3 1016 aaKnown RBP17.67■□□□□ 0.42
CMTM3-213ENST00000566756 RASA4BC9J798 803 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 RASA4O43374 803 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 TAC1P20366 129 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 ZNF157P51786 506 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-213ENST00000566756 MKRN4PQ13434 485 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-213ENST00000566756 SPOCD1Q6ZMY3 1216 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 POLNQ7Z5Q5 900 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 SAPCD2Q86UD0 394 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 EXOC8Q8IYI6 725 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 C9orf72Q96LT7 481 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 SPATA33Q96N06 139 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 ECT2Q9H8V3 914 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 USTQ9Y2C2 406 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 STARD13Q9Y3M8 1113 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 EXOC1LA0A1B0GW35 172 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 LRRIQ4A6NIV6 560 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 ALOX15BO15296 676 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 MAFO75444 373 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-213ENST00000566756 KRT1P04264 644 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 VCPP55072 806 aaKnown RBP17.66■□□□□ 0.42
CMTM3-213ENST00000566756 INHBEP58166 350 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 SURF1Q15526 300 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 OASLQ15646 514 aaKnown RBP17.66■□□□□ 0.42
CMTM3-213ENST00000566756 TFDP3Q5H9I0 405 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 PPP1R15BQ5SWA1 713 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 DAB2IPQ5VWQ8 1189 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 RGMBQ6NW40 437 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 PCGF5Q86SE9 256 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 TMEM35BQ8NCS4 154 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 TMEM143Q96AN5 459 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 FAM84AQ96KN4 292 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 PWWP2AQ96N64 755 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 TARS2Q9BW92 718 aaKnown RBP17.66■□□□□ 0.42
CMTM3-213ENST00000566756 KATNBL1Q9H079 304 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 PCDH9Q9HC56 1237 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 ARHGEF3Q9NR81 526 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 PDGFCQ9NRA1 345 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 SLC24A2Q9UI40 661 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 DNPEPQ9ULA0 475 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 PCDHGC3Q9UN70 934 aa17.66■□□□□ 0.42
CMTM3-213ENST00000566756 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 SLC15A5A6NIM6 579 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 ASMTLO95671 621 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 GH1P01241 217 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 CCNB1P14635 433 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 EIF4BP23588 611 aaKnown RBP17.65■□□□□ 0.42
CMTM3-213ENST00000566756 SSR1P43307 286 aaKnown RBP17.65■□□□□ 0.42
CMTM3-213ENST00000566756 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 ZC3H12AQ5D1E8 599 aaKnown RBP17.65■□□□□ 0.42
CMTM3-213ENST00000566756 DNAJC24Q6P3W2 148 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 MFSD7Q6UXD7 560 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 DPP9Q86TI2 863 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 OR5B17Q8NGF7 314 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 DENND1AQ8TEH3 1009 aa17.65■□□□□ 0.42
CMTM3-213ENST00000566756 EMID1Q96A84 441 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-213ENST00000566756 ZBTB45Q96K62 511 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-213ENST00000566756 SSU72Q9NP77 194 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms