RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 NGEFQ8N5V2 710 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 SLC15A4Q8N697 577 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 DCBLD1Q8N8Z6 715 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 NUP43Q8NFH3 380 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 SSH3Q8TE77 659 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 AFAP1L1Q8TED9 768 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 STON2Q8WXE9 905 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 STAMQ92783 540 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 TBC1D31Q96DN5 1066 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 CALML4Q96GE6 196 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 HHIPL1Q96JK4 782 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 ADPGKQ9BRR6 497 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 AMNQ9BXJ7 453 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 FTOQ9C0B1 505 aaKnown RBP eCLIP3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 ZNF518BQ9C0D4 1074 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 BRD8Q9H0E9 1235 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 CHODLQ9H9P2 273 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 DBNDD1Q9H9R9 158 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 SMURF2Q9HAU4 748 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 CALCOCO1Q9P1Z2 691 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 DNAI1Q9UI46 699 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 TMEM59LQ9UK28 342 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 AJAP1Q9UKB5 411 aaPredicted RBP3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 TAF6LQ9Y6J9 622 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 DISP3Q9P2K9 1392 aa3.71□□□□□ -1.82
HERPUD1-211ENST00000566550 RPTORQ8N122 1335 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 RSF1Q96T23 1441 aaPredicted RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 A0A087WZ62 844 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 A0A0A6YYJ9 748 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 FADS2P1A8MWK0 482 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 NT5C1B-RDH14C9J2C7 533 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 H7C0S8 307 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 MYO1CO00159 1063 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 GTPBP1O00178 669 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SGSM2O43147 1006 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ADCY6O43306 1168 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 UNC5CO95185 931 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ABHD16AO95870 558 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 HPXP02790 462 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 TK1P04183 234 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 AMY1AP04745 511 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 TXNP10599 105 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ACADMP11310 421 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 CPA1P15085 419 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 FAHP16930 419 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 KLRC1P26715 233 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 KLRK1P26718 216 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 IL1R2P27930 398 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ARL3P36405 182 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 PIK3CAP42336 1068 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SLC6A11P48066 632 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 HK2P52789 917 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ALDH18A1P54886 795 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 RTP1P59025 263 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 KRT83P78385 493 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 MC1RQ01726 317 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SCAPQ12770 1279 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 CHAF1BQ13112 559 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 HABP2Q14520 560 aaPredicted RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 KIR3DS1Q14943 382 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 TARBP2Q15633 366 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 MAN2A1Q16706 1144 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 TMEM266Q2M3C6 531 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SPATS1Q496A3 300 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 CTXN3Q4LDR2 81 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ATPAF1Q5TC12 328 aaPredicted RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 MAP3K21Q5TCX8 1036 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SNX30Q5VWJ9 437 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 CD276Q5ZPR3 534 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ARL6IP4Q66PJ3 421 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 RAP1GAP2Q684P5 730 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ZNF449Q6P9G9 518 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ATF7IPQ6VMQ6 1270 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SYNE3Q6ZMZ3 975 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 Q6ZVL8 140 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SYT13Q7L8C5 426 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 TMPRSS7Q7RTY8 843 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SLCO6A1Q86UG4 719 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 FAM90A1Q86YD7 464 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SLC44A2Q8IWA5 706 aaPredicted RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 YAF2Q8IY57 180 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 LILRA2Q8N149 483 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 C17orf53Q8N3J3 647 aaPredicted RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SRBD1Q8N5C6 995 aaKnown RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 DNAJC5GQ8N7S2 189 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 MSANTD4Q8NCY6 345 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 OR5AN1Q8NGI8 311 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 TBC1D22AQ8WUA7 517 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 RAPGEF4Q8WZA2 1011 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SEC14L1Q92503 715 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 HOXB13Q92826 284 aaPredicted RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 ATP2A3Q93084 1043 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 SNX21Q969T3 373 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 EID2BQ96D98 161 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 NEIL1Q96FI4 390 aaPredicted RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 DYDC2Q96IM9 177 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 MAP6Q96JE9 813 aa3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 MYCBPQ99417 103 aaPredicted RBP3.7□□□□□ -1.82
HERPUD1-211ENST00000566550 GDF15Q99988 308 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms