RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 HSPBP1Q9NZL4 362 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 UXTQ9UBK9 157 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-212ENST00000566121 COL4A2P08572 1712 aa16.31■□□□□ 0.2
CMTM3-212ENST00000566121 NOL4O94818 638 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 MYL1P05976 194 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 TMEM191BP0C7N4 346 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 CHRNB1P11230 501 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 TDGF1P13385 188 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 GJA1P17302 382 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 PFKLP17858 780 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 HOXA6P31267 233 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 GRM2Q14416 872 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 PPP2R5DQ14738 602 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 MAPRE1Q15691 268 aaKnown RBP16.3■□□□□ 0.2
CMTM3-212ENST00000566121 SOWAHAQ2M3V2 549 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 MGAT5BQ3V5L5 792 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 INTS6LQ5JSJ4 861 aaKnown RBP16.3■□□□□ 0.2
CMTM3-212ENST00000566121 TMEM150AQ86TG1 271 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 HSCBQ8IWL3 235 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 YAF2Q8IY57 180 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 CMTM8Q8IZV2 173 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 TTC9BQ8N6N2 239 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 CELF5Q8N6W0 485 aaKnown RBP16.3■□□□□ 0.2
CMTM3-212ENST00000566121 SUMF1Q8NBK3 374 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 GOLGA5Q8TBA6 731 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 FAM3CQ92520 227 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 RSPRY1Q96DX4 576 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 LRRC3BQ96PB8 259 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 GCNAQ96QF7 691 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 SEPT5Q99719 369 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-212ENST00000566121 SLITRK6Q9H5Y7 841 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 KIF9Q9HAQ2 790 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 AGPAT3Q9NRZ7 376 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-212ENST00000566121 DDX43Q9NXZ2 648 aaKnown RBP16.3■□□□□ 0.2
CMTM3-212ENST00000566121 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 USP25Q9UHP3 1055 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 PIAS3Q9Y6X2 628 aa16.3■□□□□ 0.2
CMTM3-212ENST00000566121 NCANO14594 1321 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 DNAH14Q0VDD8 3507 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
CMTM3-212ENST00000566121 KINO60870 393 aaKnown RBP16.29■□□□□ 0.2
CMTM3-212ENST00000566121 TACC1O75410 805 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 TNNC2P02585 160 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 SLFN14P0C7P3 912 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 CD72P21854 359 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 ASIC1P78348 528 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 PSMD6Q15008 389 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 DGKKQ5KSL6 1271 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 GPR158Q5T848 1215 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 VSTM1Q6UX27 236 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 MON1AQ86VX9 555 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 GPR161Q8N6U8 529 aaKnown RBP16.29■□□□□ 0.2
CMTM3-212ENST00000566121 BPIFB1Q8TDL5 484 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 CSGALNACT1Q8TDX6 532 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 SCFD1Q8WVM8 642 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 SPATA17Q96L03 361 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 SLC46A2Q9BY10 475 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 PCIF1Q9H4Z3 704 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 TMLHEQ9NVH6 421 aa16.29■□□□□ 0.2
CMTM3-212ENST00000566121 THG1LQ9NWX6 298 aaKnown RBP16.29■□□□□ 0.2
CMTM3-212ENST00000566121 R3HCC1Q9Y3T6 440 aaKnown RBP16.29■□□□□ 0.2
CMTM3-212ENST00000566121 DPYSL4O14531 572 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 TCF3P15923 654 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 WARSP23381 471 aaKnown RBP16.28■□□□□ 0.2
CMTM3-212ENST00000566121 CCR3P51677 355 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 AP3M2P53677 418 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 NLRP12P59046 1061 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 CLDN10P78369 228 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 PSMD2Q13200 908 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 LRRC32Q14392 662 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 SNRNP35Q16560 246 aaKnown RBP16.28■□□□□ 0.2
CMTM3-212ENST00000566121 C4orf50Q6ZRC1 276 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 HS2ST1Q7LGA3 356 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 TRAPPC11Q7Z392 1133 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 CBWD2Q8IUF1 395 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 SLC9A9Q8IVB4 645 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 SPEM1Q8N4L4 309 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 XXYLT1Q8NBI6 393 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 GLIS3Q8NEA6 775 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 RUBCNQ92622 972 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 DHX58Q96C10 678 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 HPDLQ96IR7 371 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 LPIN3Q9BQK8 851 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 FAM83CQ9BQN1 747 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 MTMR12Q9C0I1 747 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 EPC1Q9H2F5 836 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 CDH9Q9ULB4 789 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 SNX9Q9Y5X1 595 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 R4GN57 208 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 NUP210Q8TEM1 1887 aaPredicted RBP16.28■□□□□ 0.2
CMTM3-212ENST00000566121 PATJQ8NI35 1801 aa16.28■□□□□ 0.2
CMTM3-212ENST00000566121 FAM237AA0A1B0GTK4 181 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 GOLGA8IPA6NC78 632 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 GOLGA8JA6NMD2 632 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 SOAT2O75908 522 aa16.27■□□□□ 0.2
CMTM3-212ENST00000566121 ATICP31939 592 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms