RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 OVOS1Q6IE37 1185 aa19.89■□□□□ 0.77
COMMD4-213ENST00000565834 LCLAT1Q6UWP7 414 aa19.89■□□□□ 0.77
COMMD4-213ENST00000565834 TNS4Q8IZW8 715 aa19.89■□□□□ 0.77
COMMD4-213ENST00000565834 C1orf131Q8NDD1 294 aaKnown RBP19.89■□□□□ 0.77
COMMD4-213ENST00000565834 DPF3Q92784 378 aa19.89■□□□□ 0.77
COMMD4-213ENST00000565834 SECISBP2LQ93073 1101 aaKnown RBP19.89■□□□□ 0.77
COMMD4-213ENST00000565834 THAP2Q9H0W7 228 aa19.89■□□□□ 0.77
COMMD4-213ENST00000565834 MARCH5Q9NX47 278 aa19.89■□□□□ 0.77
COMMD4-213ENST00000565834 TSPAN16Q9UKR8 245 aa19.89■□□□□ 0.77
COMMD4-213ENST00000565834 VWA8A3KMH1 1905 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 CCDC85CA6NKD9 419 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 TNNT1P13805 278 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 ALDH7A1P49419 539 aaKnown RBP19.88■□□□□ 0.77
COMMD4-213ENST00000565834 PSMC1P62191 440 aaKnown RBP19.88■□□□□ 0.77
COMMD4-213ENST00000565834 GOLGA7BQ2TAP0 167 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 ARHGAP17Q68EM7 881 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 CMTR2Q8IYT2 770 aaKnown RBP19.88■□□□□ 0.77
COMMD4-213ENST00000565834 TRIM11Q96F44 468 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 LBHD1Q9BQE6 289 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-213ENST00000565834 SYT15Q9BQS2 421 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.88■□□□□ 0.77
COMMD4-213ENST00000565834 IRX2Q9BZI1 471 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-213ENST00000565834 CWH43Q9H720 699 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 MYO1AQ9UBC5 1043 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 CDH9Q9ULB4 789 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 PAXBP1Q9Y5B6 917 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 NCANO14594 1321 aa19.88■□□□□ 0.77
COMMD4-213ENST00000565834 SF3B1O75533 1304 aaKnown RBP eCLIP19.88■□□□□ 0.77
COMMD4-213ENST00000565834 TUBB4AP04350 444 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 PTPN1P18031 435 aaKnown RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 PBX3P40426 434 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 GNG11P61952 73 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 ETF1P62495 437 aaKnown RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 GPC5P78333 572 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 BTG3Q14201 252 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 SPOUT1Q5T280 376 aaKnown RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 PHF13Q86YI8 300 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 MCOLN2Q8IZK6 566 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 RNF10Q8N5U6 811 aaKnown RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 ZNF653Q96CK0 615 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 YME1L1Q96TA2 773 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 LPIN3Q9BQK8 851 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 HESX1Q9UBX0 185 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 A0A0A6YYK5 440 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 NT5C1B-RDH14C9J2C7 533 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 SYN3O14994 580 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 ATP2C2O75185 946 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 CCDC130P13994 396 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 TKTP29401 623 aaKnown RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 NAP1L1P55209 391 aaKnown RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 YWHAHQ04917 246 aaPredicted RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 ELAVL2Q12926 359 aaKnown RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 DNTTIP2Q5QJE6 756 aaKnown RBP19.87■□□□□ 0.77
COMMD4-213ENST00000565834 MON1BQ7L1V2 547 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 THEM5Q8N1Q8 247 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 WDTC1Q8N5D0 677 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 RFFLQ8WZ73 363 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 ARHGEF26Q96DR7 871 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 NOX5Q96PH1 765 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 ACBD6Q9BR61 282 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 ADAM22Q9P0K1 906 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 SALL4Q9UJQ4 1053 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 GTF3C4Q9UKN8 822 aa19.87■□□□□ 0.77
COMMD4-213ENST00000565834 MYBL1P10243 752 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 C1QBPQ07021 282 aaKnown RBP19.86■□□□□ 0.77
COMMD4-213ENST00000565834 MDH1BQ5I0G3 518 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 ZNF569Q5MCW4 686 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 KIAA0319Q5VV43 1072 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 FUT10Q6P4F1 479 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 MMS22LQ6ZRQ5 1243 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 UBA3Q8TBC4 463 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 HERVK_113Q902F9 699 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 VCPIP1Q96JH7 1222 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 RTP3Q9BQQ7 232 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 C11orf70Q9BRQ4 267 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 CRTAC1Q9NQ79 661 aa19.86■□□□□ 0.77
COMMD4-213ENST00000565834 CXXC1Q9P0U4 656 aaPredicted RBP19.86■□□□□ 0.77
COMMD4-213ENST00000565834 BUB1O43683 1085 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 GJB5O95377 273 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 MOCS3O95396 460 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 MMP8P22894 467 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 ADORA2BP29275 332 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 GPD2P43304 727 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 NOP2P46087 812 aaKnown RBP19.85■□□□□ 0.77
COMMD4-213ENST00000565834 IFI16Q16666 785 aaKnown RBP19.85■□□□□ 0.77
COMMD4-213ENST00000565834 LIN9Q5TKA1 542 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 FAM171A1Q5VUB5 890 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 SYT10Q6XYQ8 523 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 ERICH1Q86X53 443 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 MSANTD4Q8NCY6 345 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 SLC2A14Q8TDB8 520 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 GPR62Q9BZJ7 368 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 CNOT8Q9UFF9 292 aaKnown RBP19.85■□□□□ 0.77
COMMD4-213ENST00000565834 KIAA1671Q9BY89 1806 aa19.85■□□□□ 0.77
COMMD4-213ENST00000565834 ATMINO43313 823 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 CYP1A2P05177 515 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 CALB1P05937 261 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 LAG3P18627 525 aa19.84■□□□□ 0.77
COMMD4-213ENST00000565834 INTS6LQ5JSJ4 861 aaKnown RBP19.84■□□□□ 0.77
COMMD4-213ENST00000565834 KCNT2Q6UVM3 1135 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms