RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 FHOD1Q9Y613 1164 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 KIF7Q2M1P5 1343 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 WDR19Q8NEZ3 1342 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 A0A1B0GUL6 1792 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 A0A087X0M5 115 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TRAV34A0A0B4J273 112 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 A0A1B0GX30 115 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 EBAG9O00559 213 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 LCE2BO14633 110 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ADAMTS3O15072 1205 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 NEMFO60524 1076 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 GREM1O60565 184 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 AOC2O75106 756 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TRPA1O75762 1119 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 MYL4P12829 197 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 KRT5P13647 590 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CSF2RAP15509 400 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 HOXD13P35453 343 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 NNMTP40261 264 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TUBA1BP68363 451 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CCNA1P78396 465 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CEBPZQ03701 1054 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 EFTUD2Q15029 972 aaKnown RBP eCLIP3.26□□□□□ -1.892e-6■■■■□ 24.8
CHD9-216ENST00000565803 CNN3Q15417 329 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 MAPKAPK3Q16644 382 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 KRTCAP3Q53RY4 240 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 RRAGBQ5VZM2 374 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 MTFR2Q6P444 385 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 KLHL17Q6TDP4 642 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PRR23CQ6ZRP0 262 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TUBA1AQ71U36 451 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 OVCH2Q7RTZ1 564 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 UBE3BQ7Z3V4 1068 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 KIAA1328Q86T90 577 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PHC2Q8IXK0 858 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SRRM1Q8IYB3 904 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 PRR18Q8N4B5 295 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 FAM13CQ8NE31 585 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 OR6P1Q8NGX9 317 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ETNPPLQ8TBG4 499 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ADAMTS18Q8TE60 1221 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 DENND1AQ8TEH3 1009 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 GMCL1Q96IK5 515 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PNMA5Q96PV4 448 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TSG101Q99816 390 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 OSBPL10Q9BXB5 764 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ARHGAP39Q9C0H5 1083 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CORO1CQ9ULV4 474 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 CSADQ9Y600 493 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SQORQ9Y6N5 450 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 COL4A6Q14031 1691 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 OTOFQ9HC10 1997 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ZNF541Q9H0D2 1346 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 TBKBP1A7MCY6 615 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 WDR64B1ANS9 1081 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 GOLGA8SH3BPF8 625 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CAPN9O14815 690 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 BUB1O43683 1085 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 DTNBO60941 627 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ULK1O75385 1050 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 RFPL3O75679 317 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 BCAS2O75934 225 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 TSPAN9O75954 239 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SEC31AO94979 1220 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 ASLP04424 464 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 INHBAP08476 426 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CSH1P0DML2 217 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CSH2P0DML3 217 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 KITP10721 976 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PDIA3P30101 505 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 ADD1P35611 737 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 GGCXP38435 758 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 THPOP40225 353 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 MTIF2P46199 727 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 ALDH9A1P49189 494 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 HARS2P49590 506 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 CARD18P57730 90 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 YBEYP58557 167 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 SUMO1P63165 101 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 OCRLQ01968 901 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 SPAG1Q07617 926 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 DNAJC3Q13217 504 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ITGB3BPQ13352 177 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 MPP3Q13368 585 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 NNTQ13423 1086 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 STK38Q15208 465 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 ALG11Q2TAA5 492 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PGS1Q32NB8 556 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 FSCBQ5H9T9 825 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 INTS6LQ5JSJ4 861 aaKnown RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 BROXQ5VW32 411 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 TATDN1Q6P1N9 297 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 PACS1Q6VY07 963 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 USP53Q70EK8 1073 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 IKBIPQ70UQ0 350 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 CHST15Q7LFX5 561 aaPredicted RBP3.26□□□□□ -1.89
CHD9-216ENST00000565803 KRT25Q7Z3Z0 450 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 DPP9Q86TI2 863 aa3.26□□□□□ -1.89
CHD9-216ENST00000565803 NCAPG2Q86XI2 1143 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms