RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 TRIM68Q6AZZ1 485 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 DNAJB7Q7Z6W7 309 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-215ENST00000565559 CPA6Q8N4T0 437 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 PNPLA1Q8N8W4 532 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 MDGA1Q8NFP4 955 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 CD101Q93033 1021 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 PSMG2Q969U7 264 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 CHFRQ96EP1 664 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 SUSD3Q96L08 255 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 TBC1D32Q96NH3 1257 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 PGLYRP2Q96PD5 576 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-215ENST00000565559 SMG9Q9H0W8 520 aaKnown RBP12.14□□□□□ -0.47
CAPN3-215ENST00000565559 SH3GLB2Q9NR46 395 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 ANKEF1Q9NU02 776 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 PILRBQ9UKJ0 227 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 PCDHA4Q9UN74 947 aa12.14□□□□□ -0.47
CAPN3-215ENST00000565559 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
CAPN3-215ENST00000565559 ABCA7Q8IZY2 2146 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 OTOL1A6NHN0 477 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-215ENST00000565559 ACKR2O00590 384 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 SLC37A4O43826 429 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 SYPP08247 313 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 SERPINF2P08697 491 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 CD59P13987 128 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 U2AF2P26368 475 aaKnown RBP eCLIP12.13□□□□□ -0.47
CAPN3-215ENST00000565559 RPL9P32969 192 aaKnown RBP12.13□□□□□ -0.47
CAPN3-215ENST00000565559 USP46P62068 366 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 CYP4F8P98187 520 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 SOX4Q06945 474 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-215ENST00000565559 DUSP4Q13115 394 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 VEPH1Q14D04 833 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 NTRK3Q16288 839 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 TOGARAM2Q6ZUX3 1019 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 DAGLBQ8NCG7 672 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 BEST2Q8NFU1 509 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 WHAMMQ8TF30 809 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 CRELD1Q96HD1 420 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 RNF26Q9BY78 433 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-215ENST00000565559 KIF9Q9HAQ2 790 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 IGSF5Q9NSI5 407 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 TBX20Q9UMR3 447 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 SPTA1P02549 2419 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 CFAP46Q8IYW2 2715 aa12.13□□□□□ -0.47
CAPN3-215ENST00000565559 ARHGAP6O43182 974 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 SH3BP5O60239 455 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 USO1O60763 962 aaKnown RBP12.12□□□□□ -0.47
CAPN3-215ENST00000565559 ARSAP15289 507 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 IFNAR1P17181 557 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 ITPKAP23677 461 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 GJA4P35212 333 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 P2RY2P41231 377 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 YWHAHQ04917 246 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-215ENST00000565559 RABEP1Q15276 862 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 TAF12Q16514 161 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 PEAR1Q5VY43 1037 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-215ENST00000565559 NAXDQ8IW45 347 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 CMTM8Q8IZV2 173 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 ZNF843Q8N446 348 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 OLIG1Q8TAK6 271 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 PIP4K2CQ8TBX8 421 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 RLN3Q8WXF3 142 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 SPSB2Q99619 263 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 CCDC94Q9BW85 323 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-215ENST00000565559 SLC26A6Q9BXS9 759 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 POLMQ9NP87 494 aaPredicted RBP12.12□□□□□ -0.47
CAPN3-215ENST00000565559 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 DNAAF2Q9NVR5 837 aaKnown RBP12.12□□□□□ -0.47
CAPN3-215ENST00000565559 BCCIPQ9P287 314 aaKnown RBP eCLIP12.12□□□□□ -0.47
CAPN3-215ENST00000565559 THADAQ6YHU6 1953 aa12.12□□□□□ -0.47
CAPN3-215ENST00000565559 AP5Z1O43299 807 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 PFKFB2O60825 505 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 SLITRK3O94933 977 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 LYPLA2O95372 231 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 OR4Q2P0C623 313 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
CAPN3-215ENST00000565559 RARRES1P49788 294 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 CCT2P78371 535 aaKnown RBP12.11□□□□□ -0.47
CAPN3-215ENST00000565559 CYP4F3Q08477 520 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 GPR17Q13304 367 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 INF2Q27J81 1249 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 EEF1DP3Q658K8 133 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 CPLX2Q6PUV4 134 aaKnown RBP12.11□□□□□ -0.47
CAPN3-215ENST00000565559 MAEAQ7L5Y9 396 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 KRT25Q7Z3Z0 450 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 USP37Q86T82 979 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 BLIDQ8IZY5 108 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 MCPH1Q8NEM0 835 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 THAP11Q96EK4 314 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 CAMK1GQ96NX5 476 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 FNBP1Q96RU3 617 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 SLC46A2Q9BY10 475 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 CLMPQ9H6B4 373 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 CAPN10Q9HC96 672 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 MMP17Q9ULZ9 603 aa12.11□□□□□ -0.47
CAPN3-215ENST00000565559 NUP210Q8TEM1 1887 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms