RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 IL21Q9HBE4 155 aa20.37■□□□□ 0.85
SPSB3-207ENST00000565550 SLC39A2Q9NP94 309 aa20.37■□□□□ 0.85
SPSB3-207ENST00000565550 SCN1AP35498 2009 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 HAPLN1P10915 354 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-207ENST00000565550 TDGF1P13385 188 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 SMARCB1Q12824 385 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 TAF12Q16514 161 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 SV2CQ496J9 727 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 KMT5BQ4FZB7 885 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 NT5DC4Q86YG4 428 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 SPPL2BQ8TCT7 592 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 C2orf15Q8WU43 125 aaKnown RBP20.36■□□□□ 0.85
SPSB3-207ENST00000565550 ERCC4Q92889 916 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-207ENST00000565550 SAAL1Q96ER3 474 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 MSANTD3Q96H12 275 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 TASP1Q9H6P5 420 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 C8orf33Q9H7E9 229 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-207ENST00000565550 ABI2Q9NYB9 513 aaPredicted RBP20.36■□□□□ 0.85
SPSB3-207ENST00000565550 USP25Q9UHP3 1055 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 SMG5Q9UPR3 1016 aaKnown RBP20.36■□□□□ 0.85
SPSB3-207ENST00000565550 COL4A2P08572 1712 aa20.36■□□□□ 0.85
SPSB3-207ENST00000565550 TICRRQ7Z2Z1 1910 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 PRAMEF12O95522 483 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 CDC25CP30307 473 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 CCR3P51677 355 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 TFAMQ00059 246 aaKnown RBP20.35■□□□□ 0.85
SPSB3-207ENST00000565550 GAS6Q14393 721 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 PPP2R5DQ14738 602 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 ARHGAP29Q52LW3 1261 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 EPM2AIP1Q7L775 607 aaPredicted RBP20.35■□□□□ 0.85
SPSB3-207ENST00000565550 DCP1BQ8IZD4 617 aaKnown RBP20.35■□□□□ 0.85
SPSB3-207ENST00000565550 SLC46A2Q9BY10 475 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 RBM12Q9NTZ6 932 aaKnown RBP20.35■□□□□ 0.85
SPSB3-207ENST00000565550 OBP2AQ9NY56 170 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 GTSE1Q9NYZ3 720 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 PCDHB13Q9Y5F0 798 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 ZNF292O60281 2723 aa20.35■□□□□ 0.85
SPSB3-207ENST00000565550 MYBPHLA2RUH7 354 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 SPECC1L-ADORA2AF8WAN1 911 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 WEE1P30291 646 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 POLR2BP30876 1174 aaKnown RBP20.34■□□□□ 0.85
SPSB3-207ENST00000565550 PNPLA4P41247 253 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 CXCL12P48061 93 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 NRLP54845 237 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 SATB1Q01826 763 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 DPYDQ12882 1025 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 PNOCQ13519 176 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 SCARA3Q6AZY7 606 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 C1orf228Q6PIY5 440 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 TXNDC11Q6PKC3 985 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 BRSK2Q8IWQ3 736 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 NELFCDQ8IXH7 590 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 SYCP3Q8IZU3 236 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 KIAA0895Q8NCT3 520 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 BPIFB1Q8TDL5 484 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 ZNF560Q96MR9 790 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 GCNAQ96QF7 691 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 SMG9Q9H0W8 520 aaKnown RBP20.34■□□□□ 0.85
SPSB3-207ENST00000565550 TMLHEQ9NVH6 421 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 PCDHB5Q9Y5E4 795 aa20.34■□□□□ 0.85
SPSB3-207ENST00000565550 PVALEFA0A1B0GWK0 134 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 GOLGA8IPA6NC78 632 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 GOLGA8JA6NMD2 632 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 LDHAP00338 332 aaKnown RBP20.33■□□□□ 0.85
SPSB3-207ENST00000565550 RPN1P04843 607 aaKnown RBP20.33■□□□□ 0.85
SPSB3-207ENST00000565550 ITGB3P05106 788 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 GARTP22102 1010 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 CTHP32929 405 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 FAM160A1Q05DH4 1040 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 STK4Q13043 487 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 LRRC32Q14392 662 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 PUM1Q14671 1186 aaKnown RBP eCLIP20.33■□□□□ 0.85
SPSB3-207ENST00000565550 WDR44Q5JSH3 913 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 DGLUCYQ7Z3D6 616 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 RALGPS2Q86X27 583 aaPredicted RBP20.33■□□□□ 0.85
SPSB3-207ENST00000565550 PDCL2Q8N4E4 241 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 C1orf127Q8N9H9 656 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 CACTINQ8WUQ7 758 aaKnown RBP20.33■□□□□ 0.85
SPSB3-207ENST00000565550 SCFD1Q8WVM8 642 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 SECISBP2LQ93073 1101 aaKnown RBP20.33■□□□□ 0.85
SPSB3-207ENST00000565550 FAM84AQ96KN4 292 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 CBWD1Q9BRT8 395 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 PCIF1Q9H4Z3 704 aa20.33■□□□□ 0.85
SPSB3-207ENST00000565550 RBAKQ9NYW8 714 aaPredicted RBP20.33■□□□□ 0.85
SPSB3-207ENST00000565550 WDR87Q6ZQQ6 2873 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 TSC2P49815 1807 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 GPR15P49685 360 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 TSPY1Q01534 308 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 TNK2Q07912 1038 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 SPEM1Q8N4L4 309 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 CSGALNACT2Q8N6G5 542 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 NOC3LQ8WTT2 800 aaKnown RBP20.32■□□□□ 0.84
SPSB3-207ENST00000565550 PI4K2AQ9BTU6 479 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 EXOC1Q9NV70 894 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 DLL3Q9NYJ7 618 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 L1RE1Q9UN81 338 aa20.32■□□□□ 0.84
SPSB3-207ENST00000565550 EXTL3O43909 919 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 HUS1O60921 280 aa20.31■□□□□ 0.84
SPSB3-207ENST00000565550 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms