RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	HSP90B1	P14625	803 aa	Known RBP	5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	PRKAR2B	P31323	418 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	GPR15	P49685	360 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	ADCY7	P51828	1080 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	SESN2	P58004	480 aa	Predicted RBP	5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	RAC3	P60763	192 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	ITK	Q08881	620 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	MGAT5	Q09328	741 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	DUSP8	Q13202	625 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	ZNF568	Q3ZCX4	644 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	BRDT	Q58F21	947 aa	Predicted RBP	5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	TOR2A	Q5JU69	321 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	SYDE2	Q5VT97	1194 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	SLFN13	Q68D06	897 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	HSCB	Q8IWL3	235 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	PLA2G15	Q8NCC3	412 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	OR14C36	Q8NHC7	312 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	TSPEAR	Q8WU66	669 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	RSAD2	Q8WXG1	361 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	SSH1	Q8WYL5	1049 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	HERVK_113	Q902F9	699 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	MTMR8	Q96EF0	704 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	LMF1	Q96S06	567 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	MENT	Q9BUN1	341 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	AGO3	Q9H9G7	860 aa	Known RBP	5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	JADE2	Q9NQC1	790 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	HOMER2	Q9NSB8	354 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	OAZ3	Q9UMX2	235 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	MTCH2	Q9Y6C9	303 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	SCN5A	Q14524	2016 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	COL11A1	P12107	1806 aa	Predicted RBP	5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	DOCK2	Q92608	1830 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	FREM2	Q5SZK8	3169 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	GAK	O14976	1311 aa		5.22	□□□□□ -1.57
BBS4-208	ENST00000565160	TET1	Q8NFU7	2136 aa		5.21	□□□□□ -1.57
BBS4-208	ENST00000565160	CNOT1	A5YKK6	2376 aa	Known RBP	5.21	□□□□□ -1.57
BBS4-208	ENST00000565160	SI	P14410	1827 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	RPAP1	Q9BWH6	1393 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	MED23	Q9ULK4	1368 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160		A0A1W2PR48	441 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	PRR23A	A6NEV1	266 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	EPOP	A6NHQ4	379 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	BTBD11	A6QL63	1104 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	MT-CO1	P00395	513 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	ITGB3	P05106	788 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	HMOX1	P09601	288 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	TRIM27	P14373	513 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	CCND3	P30281	292 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	MTNR1B	P49286	362 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	RPS8	P62241	208 aa	Known RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	CCT2	P78371	535 aa	Known RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	MRPS9	P82933	396 aa	Known RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	CDK17	Q00537	523 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	TEF	Q10587	303 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	ABCB5	Q2M3G0	1257 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	MUM1	Q2TAK8	710 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	CCDC178	Q5BJE1	867 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	KRT40	Q6A162	431 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	GPR135	Q8IZ08	494 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	CXorf38	Q8TB03	319 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	STAG1	Q8WVM7	1258 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	GCDH	Q92947	438 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	TSR2	Q969E8	191 aa	Known RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	RPL10L	Q96L21	214 aa	Known RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	GPHA2	Q96T91	129 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	ASPSCR1	Q9BZE9	553 aa		5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	SENP6	Q9GZR1	1112 aa	Predicted RBP	5.21	□□□□□ -1.58
BBS4-208	ENST00000565160	IGF2R	P11717	2491 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	NPEPPSL1	A6NEC2	478 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	KRTAP9-7	A8MTY7	169 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	TNPO2	O14787	897 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	TMEM127	O75204	238 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	HMMR	O75330	724 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	TOX4	O94842	621 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	FSBP	O95073	299 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	HMGB1	P09429	215 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	ALAD	P13716	330 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	OSM	P13725	252 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	NCL	P19338	710 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	CR2	P20023	1033 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	XPA	P23025	273 aa	Predicted RBP	5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	BPIFB4	P59827	614 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	SPIDR	Q14159	915 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	L1TD1	Q5T7N2	865 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	TCTN3	Q6NUS6	607 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	LILRA6	Q6PI73	481 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	TAX1BP1	Q86VP1	789 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	UNC5B	Q8IZJ1	945 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	MSL3	Q8N5Y2	521 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	ANKRD53	Q8N9V6	530 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	LPP	Q93052	612 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	RELT	Q969Z4	430 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	RMDN1	Q96DB5	314 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	RAX2	Q96IS3	184 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	SLC6A15	Q9H2J7	730 aa		5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	C12orf65	Q9H3J6	166 aa	Known RBP	5.2	□□□□□ -1.58
BBS4-208	ENST00000565160	DNAJC28	Q9NX36	388 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms