RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RUBCNQ92622 972 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 DHX58Q96C10 678 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 FUBP3Q96I24 572 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPG7-210ENST00000564409 LPIN3Q9BQK8 851 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 PCIF1Q9H4Z3 704 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 IL21Q9HBE4 155 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 DDX43Q9NXZ2 648 aaKnown RBP16.12■□□□□ 0.17
SPG7-210ENST00000564409 FAM13BQ9NYF5 915 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 NDRG2Q9UN36 371 aaKnown RBP16.12■□□□□ 0.17
SPG7-210ENST00000564409 SPTBN4Q9H254 2564 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 OBSL1O75147 1896 aa16.12■□□□□ 0.17
SPG7-210ENST00000564409 PVALEFA0A1B0GWK0 134 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 GABRDO14764 452 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 PRPF40AO75400 957 aaKnown RBP16.11■□□□□ 0.17
SPG7-210ENST00000564409 F13A1P00488 732 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 KRT19P08727 400 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 FAM163BP0C2L3 166 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 CCR3P51677 355 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 KPNA1P52294 538 aaPredicted RBP16.11■□□□□ 0.17
SPG7-210ENST00000564409 WNT7BP56706 349 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 CFAP221Q4G0U5 840 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 INTS6LQ5JSJ4 861 aaKnown RBP16.11■□□□□ 0.17
SPG7-210ENST00000564409 STXBP5Q5T5C0 1151 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 SHC4Q6S5L8 630 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 UNC13DQ70J99 1090 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 HS2ST1Q7LGA3 356 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 WDR49Q8IV35 697 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 CMTM8Q8IZV2 173 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 BPIFB1Q8TDL5 484 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 NOC3LQ8WTT2 800 aaKnown RBP16.11■□□□□ 0.17
SPG7-210ENST00000564409 RSPRY1Q96DX4 576 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 CEP295NLQ96MC4 621 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 MTMR12Q9C0I1 747 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 HSPBP1Q9NZL4 362 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 SIX4Q9UIU6 781 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 SNX9Q9Y5X1 595 aa16.11■□□□□ 0.17
SPG7-210ENST00000564409 KIF26AQ9ULI4 1882 aaPredicted RBP16.1■□□□□ 0.17
SPG7-210ENST00000564409 MYBPHLA2RUH7 354 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 TULP1O00294 542 aaPredicted RBP16.1■□□□□ 0.17
SPG7-210ENST00000564409 LILRB5O75023 590 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 HMGA1P17096 107 aaKnown RBP16.1■□□□□ 0.17
SPG7-210ENST00000564409 HOXD13P35453 343 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 ME1P48163 572 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 NLRP12P59046 1061 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 MTAPQ13126 283 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 MAPRE1Q15691 268 aaKnown RBP16.1■□□□□ 0.17
SPG7-210ENST00000564409 DGKKQ5KSL6 1271 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 LIMS2Q7Z4I7 341 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 ADGRF2Q8IZF7 708 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 SUMF1Q8NBK3 374 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 GIPC2Q8TF65 315 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 TRMT2BQ96GJ1 504 aaKnown RBP16.1■□□□□ 0.17
SPG7-210ENST00000564409 HPDLQ96IR7 371 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 MYRFLQ96LU7 910 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 PKMYT1Q99640 499 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 KIF9Q9HAQ2 790 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 LMAN1LQ9HAT1 526 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 NCANO14594 1321 aa16.1■□□□□ 0.17
SPG7-210ENST00000564409 POLR2DO15514 142 aaKnown RBP16.09■□□□□ 0.17
SPG7-210ENST00000564409 F11P03951 625 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 CHRNB1P11230 501 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 CCNE1P24864 410 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 AVPR1AP37288 418 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 MAGEA11P43364 429 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 EHHADHQ08426 723 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 SNRNP35Q16560 246 aaKnown RBP16.09■□□□□ 0.17
SPG7-210ENST00000564409 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 C4orf50Q6ZRC1 276 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 MON1AQ86VX9 555 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 CBWD2Q8IUF1 395 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 SPATA2LQ8IUW3 424 aaPredicted RBP16.09■□□□□ 0.17
SPG7-210ENST00000564409 C12orf56Q8IXR9 622 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 SYNPOQ8N3V7 929 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 SPEM1Q8N4L4 309 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 GPR161Q8N6U8 529 aaKnown RBP16.09■□□□□ 0.17
SPG7-210ENST00000564409 MRPS31Q92665 395 aaKnown RBP16.09■□□□□ 0.17
SPG7-210ENST00000564409 SECISBP2LQ93073 1101 aaKnown RBP16.09■□□□□ 0.17
SPG7-210ENST00000564409 FNBP1Q96RU3 617 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 SLC46A2Q9BY10 475 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 TMLHEQ9NVH6 421 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 GREB1Q4ZG55 1949 aa16.09■□□□□ 0.17
SPG7-210ENST00000564409 SPECC1L-ADORA2AF8WAN1 911 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 NOL4O94818 638 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 PRAMEF12O95522 483 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 CTHP32929 405 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 CYP4F8P98187 520 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 AMPD2Q01433 879 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 ZNF268Q14587 947 aaPredicted RBP16.08■□□□□ 0.16
SPG7-210ENST00000564409 PSMD6Q15008 389 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 BMT2Q1RMZ1 405 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 ITPRIPL2Q3MIP1 535 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 RESP18Q5W5W9 173 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 FAM171BQ6P995 826 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 TMEM150AQ86TG1 271 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 XXYLT1Q8NBI6 393 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 GLIS3Q8NEA6 775 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 GOLGA5Q8TBA6 731 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 HPS3Q969F9 1004 aa16.08■□□□□ 0.16
SPG7-210ENST00000564409 LRRC3BQ96PB8 259 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms