RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 LRP3O75074 770 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 TADA3O75528 432 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 ITGB3P05106 788 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 POLR2BP30876 1174 aaKnown RBP18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 HOXA6P31267 233 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 CNR2P34972 360 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 TFAMQ00059 246 aaKnown RBP18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 POSTNQ15063 836 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 TAF12Q16514 161 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 FSTL4Q6MZW2 842 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 WDR5BQ86VZ2 330 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 OSTM1Q86WC4 334 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 NT5DC4Q86YG4 428 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 BRSK2Q8IWQ3 736 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 SYNPOQ8N3V7 929 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 ZNF560Q96MR9 790 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 CNTNAP3BQ96NU0 1288 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 PKMYT1Q99640 499 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 CNTNAP3Q9BZ76 1288 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 EBF3Q9H4W6 596 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 THG1LQ9NWX6 298 aaKnown RBP18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 SEL1LQ9UBV2 794 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 AGAP1Q9UPQ3 857 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 SRPRBQ9Y5M8 271 aaKnown RBP18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 DENND4CQ5VZ89 1909 aa18.09■□□□□ 0.49
HDGFL3-203ENST00000563404 OBSL1O75147 1896 aa18.08■□□□□ 0.49
HDGFL3-203ENST00000563404 GDF9O60383 454 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 PRPF40AO75400 957 aaKnown RBP18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 ARSAP15289 507 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 ACAT1P24752 427 aaKnown RBP18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 CYP2F1P24903 491 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 RESTQ13127 1097 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 CUL4AQ13619 759 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 RUNX3Q13761 415 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 DDR2Q16832 855 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 TMEM196Q5HYL7 178 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 NAIF1Q69YI7 327 aaPredicted RBP18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 PRR23CQ6ZRP0 262 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 FAM160A2Q8N612 972 aaPredicted RBP18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 ACCSQ96QU6 501 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 FBRSL1Q9HCM7 1045 aaKnown RBP18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 POLR3BQ9NW08 1133 aaPredicted RBP18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 CCDC39Q9UFE4 941 aa18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 MAGED2Q9UNF1 606 aaPredicted RBP18.08■□□□□ 0.48
HDGFL3-203ENST00000563404 A0A087X0B3 334 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 GOLGA8IPA6NC78 632 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 GOLGA8JA6NMD2 632 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 TULP1O00294 542 aaPredicted RBP18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 SLC30A4O14863 429 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 GCNT3O95395 438 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 DDX6P26196 483 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 AVPR1AP37288 418 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 PNPLA4P41247 253 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 PXNP49023 591 aaPredicted RBP18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 TSPY1Q01534 308 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 CSRP2Q16527 193 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 RRAGBQ5VZM2 374 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 SV2BQ7L1I2 683 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 MON1AQ86VX9 555 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 NETO1Q8TDF5 533 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 LEO1Q8WVC0 666 aaPredicted RBP18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 ACBD6Q9BR61 282 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 CBWD1Q9BRT8 395 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 TDP1Q9NUW8 608 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 DDX43Q9NXZ2 648 aaKnown RBP18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 RBAKQ9NYW8 714 aaPredicted RBP18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 SIX4Q9UIU6 781 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 ZMYM5Q9UJ78 669 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 EXOC7Q9UPT5 735 aa18.07■□□□□ 0.48
HDGFL3-203ENST00000563404 FRMD3A2A2Y4 597 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 TRDMT1O14717 391 aaKnown RBP18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 NOL4O94818 638 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 EGFP01133 1207 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 CSH1P0DML2 217 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 CSH2P0DML3 217 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 GAP43P17677 238 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 GARTP22102 1010 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 BFSP1Q12934 665 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 NFE2Q16621 373 aaPredicted RBP18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 INTS6LQ5JSJ4 861 aaKnown RBP18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 SLC22A12Q96S37 553 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 PCIF1Q9H4Z3 704 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 OLFML3Q9NRN5 406 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 GTF3C4Q9UKN8 822 aa18.06■□□□□ 0.48
HDGFL3-203ENST00000563404 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 CEP68Q76N32 757 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 TMEM86AQ8N2M4 240 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 CSGALNACT2Q8N6G5 542 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 LRRC52Q8N7C0 313 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 MRPS31Q92665 395 aaKnown RBP18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 CYP2S1Q96SQ9 504 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 PANK2Q9BZ23 570 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 MTMR12Q9C0I1 747 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 KIF9Q9HAQ2 790 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 PDE11AQ9HCR9 933 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 ABCB6Q9NP58 842 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 GDAP2Q9NXN4 497 aa18.05■□□□□ 0.48
HDGFL3-203ENST00000563404 PCDHB13Q9Y5F0 798 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms