RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 VPS54Q9P1Q0 977 aa5.81□□□□□ -1.48
CNOT1-205ENST00000563283 PPARGC1AQ9UBK2 798 aaKnown RBP5.81□□□□□ -1.48
CNOT1-205ENST00000563283 ZHX1Q9UKY1 873 aaPredicted RBP5.81□□□□□ -1.48
CNOT1-205ENST00000563283 PNMA2Q9UL42 364 aa5.81□□□□□ -1.48
CNOT1-205ENST00000563283 FAM184BQ9ULE4 1060 aa5.81□□□□□ -1.48
CNOT1-205ENST00000563283 CNPY2Q9Y2B0 182 aa5.81□□□□□ -1.48
CNOT1-205ENST00000563283 MSRB2Q9Y3D2 182 aa5.81□□□□□ -1.48
CNOT1-205ENST00000563283 REV3LO60673 3130 aa5.81□□□□□ -1.48
CNOT1-205ENST00000563283 TRAV20A0A0B4J274 112 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 LOC102724159A0A0B4J2E5 919 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 GCOM1H8Y6P7 765 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 KRIT1O00522 736 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 ATP9AO75110 1047 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 STK10O94804 968 aaKnown RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 LRG1P02750 347 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 POLR2MP0CAP2 368 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 RARBP10826 455 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 PABPC1P11940 636 aaKnown RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 ZNF28P17035 718 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 CST5P28325 142 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 GJB2P29033 226 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 ACLYP53396 1101 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 KRTAP10-2P60368 255 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 PLP2Q04941 152 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 ARHGAP1Q07960 439 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 TRAF1Q13077 416 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 TRIM29Q14134 588 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 PWP2Q15269 919 aaKnown RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 PFKFB3Q16875 520 aaPredicted RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 LY6KQ17RY6 165 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 DUSP28Q4G0W2 176 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 NAALADL2Q58DX5 795 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 SLC39A5Q6ZMH5 540 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 CKAP2LQ8IYA6 745 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 CYP2W1Q8TAV3 490 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 DDX1Q92499 740 aaKnown RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 WASF1Q92558 559 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 PGBD1Q96JS3 809 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 C8orf76Q96K31 380 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 IWS1Q96ST2 819 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 TRIM55Q9BYV6 548 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 WDR11Q9BZH6 1224 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 PSTPIP2Q9H939 334 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 VTA1Q9NP79 307 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 SLC6A20Q9NP91 592 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 BARHL2Q9NY43 387 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 MAP3K20Q9NYL2 800 aaKnown RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 HSPBP1Q9NZL4 362 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 ASH2LQ9UBL3 628 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 ADD3Q9UEY8 706 aaKnown RBP5.8□□□□□ -1.48
CNOT1-205ENST00000563283 KIF3AQ9Y496 699 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 LTBP2Q14767 1821 aa5.8□□□□□ -1.48
CNOT1-205ENST00000563283 VPS37CA5D8V6 355 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-205ENST00000563283 EIF3JO75822 258 aaKnown RBP5.79□□□□□ -1.48
CNOT1-205ENST00000563283 ASGR1P07306 291 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 TXNP10599 105 aaKnown RBP5.79□□□□□ -1.48
CNOT1-205ENST00000563283 CAPN2P17655 700 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 XBP1P17861 261 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 GRK2P25098 689 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 GRK3P35626 688 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 ADCY7P51828 1080 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 PSMC6P62333 389 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 NFKB2Q00653 900 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 GUCY1B3Q02153 619 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 KIZQ2M2Z5 673 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 SPATS1Q496A3 300 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 ARHGEF16Q5VV41 709 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 KCNT2Q6UVM3 1135 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 CXCL17Q6UXB2 119 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 SEPT14Q6ZU15 432 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 TLK2Q86UE8 772 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 SAMD3Q8N6K7 520 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 CCDC148Q8NFR7 591 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 CCDC12Q8WUD4 166 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-205ENST00000563283 KAT2BQ92831 832 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 INPP4AQ96PE3 977 aaPredicted RBP5.79□□□□□ -1.48
CNOT1-205ENST00000563283 CTAGE1Q96RT6 745 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 TMEM209Q96SK2 561 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 JAM3Q9BX67 310 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 ZMYND12Q9H0C1 365 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 RIC8AQ9NPQ8 531 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 PCDHA6Q9UN73 950 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 KCNJ14Q9UNX9 436 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 Q9Y3F1 56 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 PCDHA8Q9Y5H6 950 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 CHD7Q9P2D1 2997 aa5.79□□□□□ -1.48
CNOT1-205ENST00000563283 TRANK1O15050 2925 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 SCN10AQ9Y5Y9 1956 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 IGLV3-22A0A075B6J6 115 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 TRIM43BA6NCK2 446 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 SMCO2A6NFE2 343 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 MROH6A6NGR9 719 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 C9orf118A6NHY6 69 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 H3BQV1 296 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 hCG_1984214I3L0E3 225 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 DDX3XO00571 662 aaKnown RBP eCLIP5.78□□□□□ -1.48
CNOT1-205ENST00000563283 CD4P01730 458 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 C6orf222P0C671 652 aaPredicted RBP5.78□□□□□ -1.48
CNOT1-205ENST00000563283 ARP10275 920 aa5.78□□□□□ -1.48
CNOT1-205ENST00000563283 MYCLP12524 364 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms