RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SNCAIPQ9Y6H5 919 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 COL11A1P12107 1806 aaPredicted RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 LOC102724159A0A0B4J2E5 919 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 E7ESA3 106 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 SGK1O00141 431 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 CA4P22748 312 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 RPS12P25398 132 aaKnown RBP13.77□□□□□ -0.21
USB1-207ENST00000563149 SSTR3P32745 418 aaPredicted RBP13.77□□□□□ -0.21
USB1-207ENST00000563149 OGDHQ02218 1023 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 PDE4CQ08493 712 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 ADCY1Q08828 1119 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 DNAJC3Q13217 504 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 PWP2Q15269 919 aaKnown RBP13.77□□□□□ -0.21
USB1-207ENST00000563149 TARBP2Q15633 366 aaKnown RBP13.77□□□□□ -0.21
USB1-207ENST00000563149 HIF1AQ16665 826 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 ZBTB41Q5SVQ8 909 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 ADGRD1Q6QNK2 874 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 ATP11CQ8NB49 1132 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 KLHL11Q9NVR0 708 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 STK32BQ9NY57 414 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 RABGEF1Q9UJ41 708 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 ZMYND8Q9ULU4 1186 aaPredicted RBP13.77□□□□□ -0.21
USB1-207ENST00000563149 STK38LQ9Y2H1 464 aa13.77□□□□□ -0.21
USB1-207ENST00000563149 DOCK5Q9H7D0 1870 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 LRRD1A4D1F6 860 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 SIGLEC16A6NMB1 481 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 TM9SF1O15321 606 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 CST3P01034 146 aaPredicted RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 ETS1P14921 441 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 TCF4P15884 667 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 KCNA3P22001 575 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 RPA3P35244 121 aaPredicted RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 RNASELQ05823 741 aaKnown RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 MYO1EQ12965 1108 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 FASTKD3Q14CZ7 662 aaKnown RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 TMEM132BQ14DG7 1078 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 TAZQ16635 292 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 DUOXA2Q1HG44 320 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 ACCSLQ4AC99 568 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 GPAT2Q6NUI2 795 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 BBS12Q6ZW61 710 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 KIF2BQ8N4N8 673 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 SH3TC2Q8TF17 1288 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 PYROXD1Q8WU10 500 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 NSMCE1Q8WV22 266 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 C10orf82Q8WW14 230 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 FAXDC2Q96IV6 333 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 DHRS4Q9BTZ2 278 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 MRPL4Q9BYD3 311 aaKnown RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 LHX5Q9H2C1 402 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 CYLDQ9NQC7 956 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 CISHQ9NSE2 258 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 WDR35Q9P2L0 1181 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 CHKBQ9Y259 395 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 L3MBTL1Q9Y468 752 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 SSC5DA1L4H1 1573 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 C3orf70A6NLC5 250 aaPredicted RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 E7ENQ6 273 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 C2CD2LO14523 706 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 TRAFD1O14545 582 aaPredicted RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 OGTO15294 1046 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 MED7O43513 233 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 TOM1L1O75674 476 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 BRD2P25440 801 aaKnown RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 CLNS1AP54105 237 aaKnown RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 GPX6P59796 221 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 SP2Q02086 613 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 CAPSQ13938 189 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 ACAP1Q15027 740 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 SLC1A5Q15758 541 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 SLC45A4Q5BKX6 768 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 FYB2Q5VWT5 728 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 CATSPERGQ6ZRH7 1159 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 EXOC8Q8IYI6 725 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 WDTC1Q8N5D0 677 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 NAT8LQ8N9F0 302 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 ZNF75CPQ92670 426 aaPredicted RBP13.76□□□□□ -0.21
USB1-207ENST00000563149 TMEM121Q9BTD3 319 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 TUBB6Q9BUF5 446 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 PICK1Q9NRD5 415 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 AGTPBP1Q9UPW5 1226 aa13.76□□□□□ -0.21
USB1-207ENST00000563149 LOC285556D6RIA3 1793 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 GAS2O43903 313 aaKnown RBP13.75□□□□□ -0.21
USB1-207ENST00000563149 FAM189A1O60320 539 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 MAFO75444 373 aaPredicted RBP13.75□□□□□ -0.21
USB1-207ENST00000563149 EDN1P05305 212 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 ATP2A2P16615 1042 aaKnown RBP13.75□□□□□ -0.21
USB1-207ENST00000563149 PTPRAP18433 802 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 CTCFP49711 727 aaPredicted RBP13.75□□□□□ -0.21
USB1-207ENST00000563149 CBLBQ13191 982 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 TRPC3Q13507 836 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 C4orf33Q8N1A6 199 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 CFAP61Q8NHU2 1237 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 MIEF2Q96C03 454 aa13.75□□□□□ -0.21
USB1-207ENST00000563149 ERP27Q96DN0 273 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms