RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 APBB1IPQ7Z5R6 666 aaPredicted RBP6.32□□□□□ -1.4
CDH13-206ENST00000562601 DDX53Q86TM3 631 aaKnown RBP6.32□□□□□ -1.4
CDH13-206ENST00000562601 CEP57L1Q8IYX8 460 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 FSIP1Q8NA03 581 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 ZSWIM2Q8NEG5 633 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 FBF1Q8TES7 1133 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 NOC3LQ8WTT2 800 aaKnown RBP6.32□□□□□ -1.4
CDH13-206ENST00000562601 C18orf25Q96B23 403 aaPredicted RBP6.32□□□□□ -1.4
CDH13-206ENST00000562601 PAGE5Q96GU1 130 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 TMEM169Q96HH4 297 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 ZMAT2Q96NC0 199 aaKnown RBP6.32□□□□□ -1.4
CDH13-206ENST00000562601 ACAP3Q96P50 834 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 TMEM175Q9BSA9 504 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 MSTO1Q9BUK6 570 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 CCDC94Q9BW85 323 aaPredicted RBP6.32□□□□□ -1.4
CDH13-206ENST00000562601 APOL5Q9BWW9 433 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 TRIM9Q9C026 710 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
CDH13-206ENST00000562601 TNMDQ9H2S6 317 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 PCIF1Q9H4Z3 704 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 TLE6Q9H808 572 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 AKTIPQ9H8T0 292 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 ZFYVE1Q9HBF4 777 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 KBTBD4Q9NVX7 518 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 MARCH5Q9NX47 278 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 THEGQ9P2T0 379 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 KCNG1Q9UIX4 513 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 PLXNA3P51805 1871 aa6.32□□□□□ -1.4
CDH13-206ENST00000562601 VCANP13611 3396 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 VWA8A3KMH1 1905 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 FRMD3A2A2Y4 597 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 GOLGA8IPA6NC78 632 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 C2orf71A6NGG8 1288 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 GOLGA8JA6NMD2 632 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 LACTBL1A8MY62 500 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 TADA2AO75478 443 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 CXCL8P10145 99 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 LTBRP36941 435 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 ANP32AP39687 249 aaKnown RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 SYKP43405 635 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 ACOT2P49753 483 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 NDUFV1P49821 464 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 CLCNKBP51801 687 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 GUCY2FP51841 1108 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 MRPS5P82675 430 aaKnown RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 AMPD3Q01432 767 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 UBE3AQ05086 875 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 SOX4Q06945 474 aaPredicted RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 MCL1Q07820 350 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 GRIK3Q13003 919 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 ADAM15Q13444 863 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 TUSC3Q13454 348 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 HSP90AA2PQ14568 343 aaPredicted RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 SMC1AQ14683 1233 aaKnown RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 NAB2Q15742 525 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 ENOX2Q16206 610 aaKnown RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 SLC10A6Q3KNW5 377 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 L1TD1Q5T7N2 865 aaKnown RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 ALKAL1Q6UXT8 129 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 ZPBP2Q6X784 338 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 CCDC65Q8IXS2 484 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 SYCP3Q8IZU3 236 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 GALNT11Q8NCW6 608 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 VN1R2Q8NFZ6 395 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 WFDC12Q8WWY7 111 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 SAAL1Q96ER3 474 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 SNX27Q96L92 541 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 ASB2Q96Q27 587 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 PPP1R10Q96QC0 940 aaKnown RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 ACCSQ96QU6 501 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 TCF12Q99081 682 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 C7orf25Q9BPX7 421 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 COLEC11Q9BWP8 271 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 STRA6Q9BX79 667 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 GPR62Q9BZJ7 368 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 ZBP1Q9H171 429 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 CLEC4MQ9H2X3 399 aaPredicted RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 CUEDC2Q9H467 287 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 UBE2ZQ9H832 354 aaPredicted RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 SLC39A2Q9NP94 309 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 BARX2Q9UMQ3 279 aaPredicted RBP6.31□□□□□ -1.4
CDH13-206ENST00000562601 LZTS1Q9Y250 596 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 HPSEQ9Y251 543 aa6.31□□□□□ -1.4
CDH13-206ENST00000562601 BDP1A6H8Y1 2624 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 A0A0B4J269 797 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 GOLGA6L4A6NEF3 574 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 I3L4J1 428 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 OGTO15294 1046 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 KLRC4O43908 158 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 FAM189A1O60320 539 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 CLASP2O75122 1294 aaKnown RBP6.3□□□□□ -1.4
CDH13-206ENST00000562601 TBX10O75333 385 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 GLP2RO95838 553 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 PIGRP01833 764 aa6.3□□□□□ -1.4
CDH13-206ENST00000562601 SPATA31D3P0C874 917 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms