RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 RAD54BQ9Y620 910 aa5.44□□□□□ -1.54
CNOT1-203ENST00000562046 SPATA31A3Q5VYP0 1347 aa5.44□□□□□ -1.54
CNOT1-203ENST00000562046 TMEM200CA6NKL6 621 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 AREL1O15033 823 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 SOAT2O75908 522 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 A1BGP04217 495 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 BTF3P20290 206 aaKnown RBP5.43□□□□□ -1.54
CNOT1-203ENST00000562046 PPM1AP35813 382 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 LILRA4P59901 499 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 HLXQ14774 488 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-203ENST00000562046 KRT72Q14CN4 511 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 NPY5RQ15761 445 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 GEN1Q17RS7 908 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 ARL13BQ3SXY8 428 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 PLA1AQ53H76 456 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 FAM83BQ5T0W9 1011 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 RNF207Q6ZRF8 634 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 CATSPERGQ6ZRH7 1159 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 ADGRG5Q8IZF4 528 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 SDR16C5Q8N3Y7 309 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 ZNF276Q8N554 614 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 CACTINQ8WUQ7 758 aaKnown RBP5.43□□□□□ -1.54
CNOT1-203ENST00000562046 RAPGEF4Q8WZA2 1011 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 MYEOVQ96EZ4 313 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 VPS11Q9H270 941 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 PARPBPQ9NWS1 579 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 CAPN11Q9UMQ6 739 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 MTO1Q9Y2Z2 717 aaKnown RBP5.43□□□□□ -1.54
CNOT1-203ENST00000562046 PCDHGB2Q9Y5G2 931 aa5.43□□□□□ -1.54
CNOT1-203ENST00000562046 A0A087WZ62 844 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 IFRD1O00458 451 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 ERN1O75460 977 aaKnown RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 C1SP09871 688 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 HSPA7P48741 367 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 VAV2P52735 878 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 LOXL3P58215 753 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 RPS7P62081 194 aaKnown RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 SCAPQ12770 1279 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 RESTQ13127 1097 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 MPEG1Q2M385 716 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 CD300EQ496F6 205 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 SP5Q6BEB4 398 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 FCRL6Q6DN72 434 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 C1orf228Q6PIY5 440 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 TMEM108Q6UXF1 575 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 MICALCLQ6ZW33 695 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 RHOUQ7L0Q8 258 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 RNF44Q7L0R7 432 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 SMC5Q8IY18 1101 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 FAM109AQ8N4B1 249 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 CPEB3Q8NE35 698 aaKnown RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 MORC4Q8TE76 937 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 SLC25A43Q8WUT9 341 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 PSMD1Q99460 953 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 ALOXE3Q9BYJ1 711 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 DHX36Q9H2U1 1008 aaKnown RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 UNKLQ9H9P5 680 aaKnown RBP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 AS3MTQ9HBK9 375 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 GALNT9Q9HCQ5 603 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 PTPRHQ9HD43 1115 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 ARFGAP3Q9NP61 516 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 CDC23Q9UJX2 597 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 ITGB1BP2Q9UKP3 347 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 SHOC2Q9UQ13 582 aa5.42□□□□□ -1.54
CNOT1-203ENST00000562046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.42□□□□□ -1.54
CNOT1-203ENST00000562046 LOC102723971A0A1B0GUV8 181 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 PLEKHD1A6NEE1 506 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 C1QTNF3-AMACRE9PGA6 284 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 TOR1BO14657 336 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 CCP110O43303 1012 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 THAP12O43422 761 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 CDKL5O76039 1030 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 NDUFA10O95299 355 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 PEX11BO96011 259 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 GATA3P23771 443 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 ACVR2AP27037 513 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 IL1R2P27930 398 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 NDUFV1P49821 464 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 CHAF1AQ13111 956 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-203ENST00000562046 STK3Q13188 491 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 SPATS1Q496A3 300 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 ARMC6Q6NXE6 501 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 ERAP2Q6P179 960 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 BEND5Q7L4P6 421 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 KRT28Q7Z3Y7 464 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 YAF2Q8IY57 180 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 FAM9AQ8IZU1 332 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-203ENST00000562046 ENAHQ8N8S7 591 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-203ENST00000562046 VPS37AQ8NEZ2 397 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 RNF31Q96EP0 1072 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 PPP1R9BQ96SB3 815 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 OSBPL9Q96SU4 736 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 PTDSS2Q9BVG9 487 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 SELENOOQ9BVL4 669 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 DNMT3BQ9UBC3 853 aaKnown RBP5.41□□□□□ -1.54
CNOT1-203ENST00000562046 DKK4Q9UBT3 224 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 ZNF212Q9UDV6 495 aa5.41□□□□□ -1.54
CNOT1-203ENST00000562046 ARID4BQ4LE39 1312 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-203ENST00000562046 H7C4K7 107 aa5.4□□□□□ -1.54
CNOT1-203ENST00000562046 KCNQ3O43525 872 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms