RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 FAM30AQ9NZY2 134 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 HS3ST4Q9Y661 456 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 KIF20AO95235 890 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 FOSP01100 380 aaPredicted RBP7.61□□□□□ -1.19
SMG1-204ENST00000561940 GRPP07492 148 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 CKBP12277 381 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 IL1R1P14778 569 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 KRT4P19013 534 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 DDX6P26196 483 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMG1-204ENST00000561940 SLC11A2P49281 568 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 OCA2Q04671 838 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 TP53BP2Q13625 1128 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 LAIR1Q6GTX8 287 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 ULK2Q8IYT8 1036 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 MPP5Q8N3R9 675 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 TMEM132CQ8N3T6 1108 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 SLC15A4Q8N697 577 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 DNAJC5GQ8N7S2 189 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 PDPRQ8NCN5 879 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 SCAMP4Q969E2 229 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 ADAM2Q99965 735 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 BRIP1Q9BX63 1249 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
SMG1-204ENST00000561940 VSX1Q9NZR4 365 aaPredicted RBP7.61□□□□□ -1.19
SMG1-204ENST00000561940 A0A1W2PPC4 97 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 NBNO60934 754 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 CFIP05156 583 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 HLA-DOAP06340 250 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 FCER1AP12319 257 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 GCSHP23434 173 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 GUCY1B3Q02153 619 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 TRIM14Q14142 442 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 SLC35G1Q2M3R5 365 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 DGKKQ5KSL6 1271 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 B3GNTL1Q67FW5 361 aaPredicted RBP7.6□□□□□ -1.19
SMG1-204ENST00000561940 LDLRAD3Q86YD5 345 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 AOPEPQ8N6M6 819 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 FAM46DQ8NEK8 389 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 RNF31Q96EP0 1072 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 CHFRQ96EP1 664 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 ALOXE3Q9BYJ1 711 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 IKZF4Q9H2S9 585 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 RNPEPQ9H4A4 650 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 SERHL2Q9H4I8 314 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 ARFGAP3Q9NP61 516 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 PADI4Q9UM07 663 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 CDYLQ9Y232 598 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 TBC1D30Q9Y2I9 924 aa7.6□□□□□ -1.19
SMG1-204ENST00000561940 A0A087WWL8 130 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 PYCARD-AS1I3L0S3 204 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 FGF18O76093 207 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 SPDEFO95238 335 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 GPANK1O95872 356 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 PIM1P11309 404 aaPredicted RBP7.59□□□□□ -1.19
SMG1-204ENST00000561940 MAPK10P53779 464 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 BTKQ06187 659 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 DCAF12L1Q5VU92 463 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 LMBRD2Q68DH5 695 aaPredicted RBP7.59□□□□□ -1.19
SMG1-204ENST00000561940 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.59□□□□□ -1.19
SMG1-204ENST00000561940 ATP11CQ8NB49 1132 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 SNX22Q96L94 193 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 ZNF518BQ9C0D4 1074 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 RNF181Q9P0P0 153 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 DKK2Q9UBU2 259 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 MTO1Q9Y2Z2 717 aaKnown RBP7.59□□□□□ -1.19
SMG1-204ENST00000561940 PLEKHM1Q9Y4G2 1056 aa7.59□□□□□ -1.19
SMG1-204ENST00000561940 VPS4BO75351 444 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 ERN1O75460 977 aaKnown RBP7.58□□□□□ -1.2
SMG1-204ENST00000561940 ANXA1P04083 346 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 FGFR2P21802 821 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 BMPR1AP36894 532 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 ZEB1P37275 1124 aaPredicted RBP7.58□□□□□ -1.2
SMG1-204ENST00000561940 DPTQ07507 201 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 RAB32Q13637 225 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 SPDYE7PQ495Y7 208 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 RRAGBQ5VZM2 374 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 ANO1Q5XXA6 986 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 FOXR2Q6PJQ5 311 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 UNC13DQ70J99 1090 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 ARHGEF19Q8IW93 802 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 NSUN7Q8NE18 718 aaKnown RBP7.58□□□□□ -1.2
SMG1-204ENST00000561940 COLEC11Q9BWP8 271 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 STK31Q9BXU1 1019 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 AS3MTQ9HBK9 375 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 HSFX1Q9UBD0 423 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 LRCH1Q9Y2L9 728 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 NOX1Q9Y5S8 564 aa7.58□□□□□ -1.2
SMG1-204ENST00000561940 CREB3O43889 395 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 RAMP2O60895 175 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 PPFIA4O75335 1185 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 MT-ND5P03915 603 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 THP07101 528 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 CHRM3P20309 590 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 HSPA7P48741 367 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 MXRA7P84157 204 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 BOP1Q14137 746 aaKnown RBP7.57□□□□□ -1.2
SMG1-204ENST00000561940 MPEG1Q2M385 716 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 ARL13BQ3SXY8 428 aa7.57□□□□□ -1.2
SMG1-204ENST00000561940 INO80DQ53TQ3 878 aaPredicted RBP7.57□□□□□ -1.2
SMG1-204ENST00000561940 PPP1R32Q7Z5V6 425 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms