RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SURF1Q15526 300 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 BMT2Q1RMZ1 405 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 GPR158Q5T848 1215 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 LIMS2Q7Z4I7 341 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 OSTM1Q86WC4 334 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 WDR49Q8IV35 697 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 CEP57L1Q8IYX8 460 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 ADGRF2Q8IZF7 708 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 ZNF687Q8N1G0 1237 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 TOP6BLQ8N6T0 577 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 DEPDC1BQ8WUY9 529 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 NKD2Q969F2 451 aaPredicted RBP11.05□□□□□ -0.64
CLK3-205ENST00000561673 E2F7Q96AV8 911 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 CLDN23Q96B33 292 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 PAGE5Q96GU1 130 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 NELL2Q99435 816 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 PKMYT1Q99640 499 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 IL21Q9HBE4 155 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 R3HCC1Q9Y3T6 440 aaKnown RBP11.05□□□□□ -0.64
CLK3-205ENST00000561673 UBE4BO95155 1302 aa11.05□□□□□ -0.64
CLK3-205ENST00000561673 A0A1B0GVL5 298 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 KLRC4O43908 158 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 CST3P01034 146 aaPredicted RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 SP9P0CG40 484 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 DLATP10515 647 aaKnown RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 HMGA1P17096 107 aaKnown RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 CMA1P23946 247 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 CYP2F1P24903 491 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 LMO2P25791 158 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 CDC25CP30307 473 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 CYP4F8P98187 520 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 CYP24A1Q07973 514 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 FCHO2Q0JRZ9 810 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 STK4Q13043 487 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 PSMD6Q15008 389 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 TAF12Q16514 161 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 NFE2Q16621 373 aaPredicted RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 DDR2Q16832 855 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 CCDC142Q17RM4 750 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 KNOP1Q1ED39 458 aaKnown RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 ARHGAP15Q53QZ3 475 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 INTS6LQ5JSJ4 861 aaKnown RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 SDHAF4Q5VUM1 108 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 DPH6Q7L8W6 267 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 HS2ST1Q7LGA3 356 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 TRAPPC11Q7Z392 1133 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 TMEM150AQ86TG1 271 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 XXYLT1Q8NBI6 393 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 STKLD1Q8NE28 680 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 SPATA18Q8TC71 538 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 LEO1Q8WVC0 666 aaPredicted RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 CCDC127Q96BQ5 260 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 FNBP1Q96RU3 617 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 SLC46A2Q9BY10 475 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 GZF1Q9H116 711 aaPredicted RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 TASP1Q9H6P5 420 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 SPATA6Q9NWH7 488 aaPredicted RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 MRPS17Q9Y2R5 130 aaKnown RBP11.04□□□□□ -0.64
CLK3-205ENST00000561673 R4GN57 208 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 TSC2P49815 1807 aa11.04□□□□□ -0.64
CLK3-205ENST00000561673 MYBPHLA2RUH7 354 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 MAN2B1O00754 1011 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 DPYSL4O14531 572 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 CHADO15335 359 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 NCAM2O15394 837 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 ATP2C2O75185 946 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 PRAMEF12O95522 483 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 F11P03951 625 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 PFKFB1P16118 471 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 TNNI1P19237 187 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 PCSK1P29120 753 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 WEE1P30291 646 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 MAGEA9P43362 315 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 RPS9P46781 194 aaKnown RBP11.03□□□□□ -0.64
CLK3-205ENST00000561673 FAM171BQ6P995 826 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 C12orf56Q8IXR9 622 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 YAF2Q8IY57 180 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 KBTBD7Q8WVZ9 684 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 FAM3CQ92520 227 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 ZNF516Q92618 1163 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 ZFYVE19Q96K21 471 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 SPATA32Q96LK8 384 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 GCNAQ96QF7 691 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 CGRRF1Q99675 332 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 SMG9Q9H0W8 520 aaKnown RBP11.03□□□□□ -0.64
CLK3-205ENST00000561673 ABCB6Q9NP58 842 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
CLK3-205ENST00000561673 NDRG2Q9UN36 371 aaKnown RBP11.03□□□□□ -0.64
CLK3-205ENST00000561673 MAGED2Q9UNF1 606 aaPredicted RBP11.03□□□□□ -0.64
CLK3-205ENST00000561673 HPSEQ9Y251 543 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 PIAS3Q9Y6X2 628 aa11.03□□□□□ -0.64
CLK3-205ENST00000561673 LAMTOR5O43504 91 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 PDGFRBP09619 1106 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 CSH1P0DML2 217 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 CSH2P0DML3 217 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 CCNE1P24864 410 aa11.02□□□□□ -0.65
CLK3-205ENST00000561673 MLLT6P55198 1093 aaPredicted RBP11.02□□□□□ -0.65
CLK3-205ENST00000561673 NLRP12P59046 1061 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms