RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 EPN2O95208 641 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 IL18RAPO95256 599 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 CSH1P0DML2 217 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 CSH2P0DML3 217 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 DDIT3P35638 169 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 PNPLA4P41247 253 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 BFSP1Q12934 665 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 ZNF268Q14587 947 aaPredicted RBP12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 IL31Q6EBC2 164 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 CC2D1AQ6P1N0 951 aaPredicted RBP12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 ZNF720Q7Z2F6 126 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 EFCAB13Q8IY85 973 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 RASSF8Q8NHQ8 419 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 LEO1Q8WVC0 666 aaPredicted RBP12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 MRPS31Q92665 395 aaKnown RBP12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 TMX3Q96JJ7 454 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 ZC3H10Q96K80 434 aaKnown RBP12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 ZNF560Q96MR9 790 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 ARRDC1-AS1Q9H2J1 176 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 EBF3Q9H4W6 596 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 SLC8A2Q9UPR5 921 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 CCL26Q9Y258 94 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 PCDHGA5Q9Y5G8 931 aa12.75□□□□□ -0.37
CARMIL3-204ENST00000561354 GREB1Q4ZG55 1949 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 DENND4CQ5VZ89 1909 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 EPG5Q9HCE0 2579 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 PPP1R37O75864 691 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 DRD1P21728 446 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 ADSSP30520 456 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 CDR1P51861 262 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 TSPY1Q01534 308 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 GRIN1Q05586 938 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 PDGFRLQ15198 375 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 ST3GAL2Q16842 350 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 FBXO43Q4G163 708 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 AASDHQ4L235 1098 aaPredicted RBP12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 PLA2G2CQ5R387 149 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 TRIM68Q6AZZ1 485 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 KBTBD6Q86V97 674 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 C12orf50Q8NA57 414 aaPredicted RBP12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 POMGNT1Q8WZA1 660 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 EXOC4Q96A65 974 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 MYRFLQ96LU7 910 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 ACBD6Q9BR61 282 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 STRA6Q9BX79 667 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 ABCB6Q9NP58 842 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 TMLHEQ9NVH6 421 aa12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 UXTQ9UBK9 157 aaPredicted RBP12.74□□□□□ -0.37
CARMIL3-204ENST00000561354 TCHHQ07283 1943 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 RNF40O75150 1001 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 PRPF40AO75400 957 aaKnown RBP12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 NOL4O94818 638 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 EGFP01133 1207 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 CCDC192P0DO97 292 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 ARSAP15289 507 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 PXNP49023 591 aaPredicted RBP12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 GALK1P51570 392 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 RPL10AP62906 217 aaKnown RBP12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 FAM160A1Q05DH4 1040 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 SF3A2Q15428 464 aaKnown RBP12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 BRAPQ7Z569 592 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 RIN3Q8TB24 985 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 TRMT2BQ96GJ1 504 aaKnown RBP12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 P2RY13Q9BPV8 354 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 PI4K2AQ9BTU6 479 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 FBRSL1Q9HCM7 1045 aaKnown RBP12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 SEL1LQ9UBV2 794 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 MAGED2Q9UNF1 606 aaPredicted RBP12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 EXOC7Q9UPT5 735 aa12.73□□□□□ -0.37
CARMIL3-204ENST00000561354 SPAG17Q6Q759 2223 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 PMLP29590 882 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 GJA4P35212 333 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 GPR15P49685 360 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 TFAMQ00059 246 aaKnown RBP12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 MTF1Q14872 753 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 SF3A1Q15459 793 aaKnown RBP12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 INTS6LQ5JSJ4 861 aaKnown RBP12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 LARP1BQ659C4 914 aaKnown RBP12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 SYT13Q7L8C5 426 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 SFR1Q86XK3 245 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 TMEM86AQ8N2M4 240 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 CPA6Q8N4T0 437 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 LRRC52Q8N7C0 313 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 CACTINQ8WUQ7 758 aaKnown RBP12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 PKMYT1Q99640 499 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 IKZF4Q9H2S9 585 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 TMEM206Q9H813 350 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 ECT2Q9H8V3 914 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 VPS45Q9NRW7 570 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 RXFP3Q9NSD7 469 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 GDAP2Q9NXN4 497 aa12.72□□□□□ -0.37
CARMIL3-204ENST00000561354 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms