RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FAM83HQ6ZRV2 1179 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 SYT13Q7L8C5 426 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CHST3Q7LGC8 479 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SZRD1Q7Z422 152 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MILR1Q7Z6M3 343 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 NLRP10Q86W26 655 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 METTL23Q86XA0 190 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 FBXO11Q86XK2 927 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 RAB11FIP4Q86YS3 637 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 HERC6Q8IVU3 1022 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CEP97Q8IW35 865 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 RBM12BQ8IXT5 1001 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 CCDC105Q8IYK2 499 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 DZIP1LQ8IYY4 767 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 DNAJC5GQ8N7S2 189 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 FSIP1Q8NA03 581 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CTCFLQ8NI51 663 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 SMARCC2Q8TAQ2 1214 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SH3RF2Q8TEC5 729 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 UTP15Q8TED0 518 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 ZNF480Q8WV37 535 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 HMGB4Q8WW32 186 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CTNNBL1Q8WYA6 563 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 SEC14L1Q92503 715 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 USP6NLQ92738 828 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 DDX17Q92841 729 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 ATP6V0A1Q93050 837 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 UBE2FQ969M7 185 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 RNF166Q96A37 237 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 CENPTQ96BT3 561 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 RBM17Q96I25 401 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 FCRL2Q96LA5 508 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 Q96M66 194 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 C16orf45Q96MC5 204 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 RUNDC3BQ96NL0 473 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TWNKQ96RR1 684 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 REEP2Q9BRK0 252 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 METTL22Q9BUU2 404 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 THUMPD3Q9BV44 507 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 DUSP23Q9BVJ7 150 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TEX12Q9BXU0 123 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 AGXT2Q9BYV1 514 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TRIM54Q9BYV2 358 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 OSBPL6Q9BZF3 934 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MS4A7Q9GZW8 240 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 ABCG4Q9H172 646 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CHST8Q9H2A9 424 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MMADHCQ9H3L0 296 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 SEMA6CQ9H3T2 930 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 ABHD16BQ9H3Z7 469 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 GSX1Q9H4S2 264 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 ACSS3Q9H6R3 686 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 UNKLQ9H9P5 680 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 RRAGCQ9HB90 399 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TMLHEQ9NVH6 421 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 HCFC1R1Q9NWW0 138 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TMEM160Q9NX00 188 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 ADPRHL2Q9NX46 363 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 STK32BQ9NY57 414 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MOCS1Q9NZB8 636 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 EHD2Q9NZN4 543 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 KCMF1Q9P0J7 381 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CEP72Q9P209 647 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 POGKQ9P215 609 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 IGSF9Q9P2J2 1179 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 TBC1D14Q9P2M4 693 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 ASH2LQ9UBL3 628 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SEC63Q9UGP8 760 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 LIMA1Q9UHB6 759 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 XPO7Q9UIA9 1087 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 SH3BGRL2Q9UJC5 107 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 MID2Q9UJV3 735 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 USP21Q9UK80 565 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 ZDHHC8Q9ULC8 765 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 NAP1L2Q9ULW6 460 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 CA14Q9ULX7 337 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 NFU1Q9UMS0 254 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 CLCA2Q9UQC9 943 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 RRP15Q9Y3B9 282 aaKnown RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 KIF3AQ9Y496 699 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 USP15Q9Y4E8 981 aaPredicted RBP2.22□□□□□ -2.05
RTF1-207ENST00000561076 TAF6LQ9Y6J9 622 aa2.22□□□□□ -2.05
RTF1-207ENST00000561076 SETD1BQ9UPS6 1966 aaKnown RBP2.21□□□□□ -2.05
RTF1-207ENST00000561076 COL17A1Q9UMD9 1497 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 SYNJ2BP-COX16A0A087WUM0 186 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PNMA6EA0A0J9YXQ4 647 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 C17orf113A0A1B0GUU1 675 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 LOC102723971A0A1B0GUV8 181 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 KRT87PA6NCN2 255 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 SAC3D1A6NKF1 404 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 AQP7P3A6NL99 342 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 H3BS24 57 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 STX16-NPEPL1H3BU86 382 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PIK3R2O00459 728 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CHL1O00533 1208 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 STX16O14662 325 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 IPO8O15397 1037 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 ZSCAN9O15535 394 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 STX6O43752 255 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 EXOC3O60645 756 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms