RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LPIN3Q9BQK8 851 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 SLC26A6Q9BXS9 759 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 ZDHHC5Q9C0B5 715 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 CRISPLD1Q9H336 500 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 FAM124BQ9H5Z6 455 aaPredicted RBP10.4□□□□□ -0.74
HERC1-210ENST00000560897 GPRC5CQ9NQ84 441 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 SH3GLB2Q9NR46 395 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 PCOLCE2Q9UKZ9 415 aa10.4□□□□□ -0.74
HERC1-210ENST00000560897 TCRBV21S2A2A0A5A6 115 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 ERVH48-1M5A8F1 160 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 SOAT2O75908 522 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 OAZ2O95190 189 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 WISP1O95388 367 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 GCFC2P16383 781 aaKnown RBP10.39□□□□□ -0.75
HERC1-210ENST00000560897 RARRES1P49788 294 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 PPP2R5AQ15172 486 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 INF2Q27J81 1249 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 HSF5Q4G112 596 aaPredicted RBP10.39□□□□□ -0.75
HERC1-210ENST00000560897 SYCP2LQ5T4T6 812 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 TMEM92Q6UXU6 159 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 DHX32Q7L7V1 743 aaKnown RBP10.39□□□□□ -0.75
HERC1-210ENST00000560897 BLIDQ8IZY5 108 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 TXNDC5Q8NBS9 432 aaKnown RBP10.39□□□□□ -0.75
HERC1-210ENST00000560897 ATAD1Q8NBU5 361 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 ENGASEQ8NFI3 743 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 NAP1L4Q99733 375 aaKnown RBP10.39□□□□□ -0.75
HERC1-210ENST00000560897 RNF26Q9BY78 433 aaPredicted RBP10.39□□□□□ -0.75
HERC1-210ENST00000560897 PRDM16Q9HAZ2 1276 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 KCNMB3Q9NPA1 279 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 HSFX1Q9UBD0 423 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 USP20Q9Y2K6 914 aa10.39□□□□□ -0.75
HERC1-210ENST00000560897 TIMM13Q9Y5L4 95 aaPredicted RBP10.39□□□□□ -0.75
HERC1-210ENST00000560897 CFAP46Q8IYW2 2715 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 FAM149AA5PLN7 773 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 PYCARD-AS1I3L0S3 204 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 CCNT1O60563 726 aaKnown RBP10.38□□□□□ -0.75
HERC1-210ENST00000560897 GJB3O75712 270 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 SLITRK3O94933 977 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 LYPLA2O95372 231 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 VNN2O95498 520 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 KLF8O95600 359 aaPredicted RBP10.38□□□□□ -0.75
HERC1-210ENST00000560897 NFATC1O95644 943 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 ATP2B1P20020 1258 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 HSPA4P34932 840 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 EIF2S3P41091 472 aaKnown RBP10.38□□□□□ -0.75
HERC1-210ENST00000560897 GRM5P41594 1212 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 GRIK2Q13002 908 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 MYBPC2Q14324 1141 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 ZNF268Q14587 947 aaPredicted RBP10.38□□□□□ -0.75
HERC1-210ENST00000560897 ZNF568Q3ZCX4 644 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 PREPLQ4J6C6 727 aaPredicted RBP10.38□□□□□ -0.75
HERC1-210ENST00000560897 CCDC157Q569K6 752 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 C6orf118Q5T5N4 469 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 DSTYKQ6XUX3 929 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 MARCH9Q86YJ5 346 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 SLFN12Q8IYM2 578 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 ALLCQ8N6M5 410 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 DRC1Q96MC2 740 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 HSPA12BQ96MM6 686 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 ACAP3Q96P50 834 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
HERC1-210ENST00000560897 IL21Q9HBE4 155 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 WNT6Q9Y6F9 365 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 MUC22E2RYF6 1773 aaPredicted RBP10.38□□□□□ -0.75
HERC1-210ENST00000560897 DENND4CQ5VZ89 1909 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 USP9XQ93008 2570 aaPredicted RBP10.38□□□□□ -0.75
HERC1-210ENST00000560897 KNTC1P50748 2209 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 PTPN13Q12923 2485 aa10.38□□□□□ -0.75
HERC1-210ENST00000560897 TSC2P49815 1807 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 MYMKA6NI61 221 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 K7EQS6 105 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 SLC28A2O43868 658 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 CBFA2T3O75081 653 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 NDUFS2O75306 463 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 CER1O95813 267 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 KCNE1P15382 129 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 TIE1P35590 1138 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 NAMPTP43490 491 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 EFNA5P52803 228 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 CXADRP78310 365 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 FAM160A1Q05DH4 1040 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 SRSF1Q07955 248 aaKnown RBP eCLIP10.37□□□□□ -0.75
HERC1-210ENST00000560897 XKR4Q5GH76 650 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 WDR45BQ5MNZ6 344 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 OVOS1Q6IE37 1185 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 NEK8Q86SG6 692 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 TRIM22Q8IYM9 498 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 TTC9BQ8N6N2 239 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
HERC1-210ENST00000560897 TRIML1Q8N9V2 468 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 RHBDD1Q8TEB9 315 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 PIGOQ8TEQ8 1089 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 GIPC2Q8TF65 315 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 C18orf25Q96B23 403 aaPredicted RBP10.37□□□□□ -0.75
HERC1-210ENST00000560897 IFT74Q96LB3 600 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 ZMAT2Q96NC0 199 aaKnown RBP10.37□□□□□ -0.75
HERC1-210ENST00000560897 LSG1Q9H089 658 aaKnown RBP10.37□□□□□ -0.75
HERC1-210ENST00000560897 CCDC113Q9H0I3 377 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 AK5Q9Y6K8 562 aa10.37□□□□□ -0.75
HERC1-210ENST00000560897 B8ZZF3 427 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms