RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 TOP6BLQ8N6T0 577 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 FNIP1Q8TF40 1166 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 ZFP42Q96MM3 310 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 GOLGA2P5Q9HBQ8 144 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 TSPAN16Q9UKR8 245 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 CITO14578 2027 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 GOLGA6L10A0A0M3HER8 536 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 A0A0U1RQF3 1178 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 A0A1W2PQ45 241 aaPredicted RBP13.65□□□□□ -0.22
SNX1-211ENST00000560829 A0A1W2PQY0 241 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 SIGLEC16A6NMB1 481 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 MEIS3P2A8K0S8 358 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 MAP2K7O14733 419 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 ZMYND10O75800 440 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 CAPN15O75808 1086 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 HEXIM1O94992 359 aaKnown RBP13.65□□□□□ -0.22
SNX1-211ENST00000560829 GLI1P08151 1106 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 SETSIPP0DME0 302 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 SLC7A5Q01650 507 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 ZNF252P-AS1Q0IIN9 211 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 LRRC38Q5VT99 294 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 DCUN1D2Q6PH85 259 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 XYLT1Q86Y38 959 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 SLC13A5Q86YT5 568 aaPredicted RBP13.65□□□□□ -0.22
SNX1-211ENST00000560829 IFT20Q8IY31 132 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 EIF1ADQ8N9N8 165 aaKnown RBP13.65□□□□□ -0.22
SNX1-211ENST00000560829 MCRS1Q96EZ8 462 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 MCEEQ96PE7 176 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 MIS12Q9H081 205 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNX1-211ENST00000560829 NR2E1Q9Y466 385 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 MGEA5O60502 916 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 SASH3O75995 380 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 GJB6O95452 261 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 ERBB2P04626 1255 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 MYBL2P10244 700 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 WARSP23381 471 aaKnown RBP13.64□□□□□ -0.23
SNX1-211ENST00000560829 MLH1P40692 756 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 PSMC1P62191 440 aaKnown RBP13.64□□□□□ -0.23
SNX1-211ENST00000560829 OGDHQ02218 1023 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 PIGHQ14442 188 aaPredicted RBP13.64□□□□□ -0.23
SNX1-211ENST00000560829 CYP1B1Q16678 543 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 ZNF618Q5T7W0 954 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 CYP4A22Q5TCH4 519 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 TRAF7Q6Q0C0 670 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 MAATS1Q7Z4T9 603 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 KATNAL2Q8IYT4 538 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 C12orf29Q8N999 325 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 APPL2Q8NEU8 664 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 OR6B3Q8NGW1 331 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 CCDC26Q8TAB7 109 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 STK32AQ8WU08 396 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 GAD1Q99259 594 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 SEZ6LQ9BYH1 1024 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 DNAI2Q9GZS0 605 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 DDX47Q9H0S4 455 aaKnown RBP13.64□□□□□ -0.23
SNX1-211ENST00000560829 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
SNX1-211ENST00000560829 TJP2Q9UDY2 1190 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 PHF24Q9UPV7 400 aa13.64□□□□□ -0.23
SNX1-211ENST00000560829 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 ARL5CA6NH57 179 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 A8MXQ7 604 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 FSCN2O14926 492 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 HUS1O60921 280 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 THP07101 528 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 PFKMP08237 780 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 FGFR1P11362 822 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 KRT3P12035 628 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 SKIP12755 728 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 TAS2R40P59535 323 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 MRPS25P82663 173 aaKnown RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 GOLGA7BQ2TAP0 167 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 PPP1R26Q5T8A7 1209 aaPredicted RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 HDXQ7Z353 690 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 ACOT1Q86TX2 421 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 TTC30AQ86WT1 665 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 ZDHHC14Q8IZN3 488 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 IPO4Q8TEX9 1081 aaKnown RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 AENQ8WTP8 325 aaKnown RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 OGFRQ9NZT2 677 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 PTCH2Q9Y6C5 1203 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 CKBP12277 381 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 CHRNA3P32297 505 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 RPL9P32969 192 aaKnown RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 RFC1P35251 1148 aaPredicted RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 GNL1P36915 607 aaPredicted RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 GUCY2DQ02846 1103 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 SIX1Q15475 284 aaPredicted RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 PRELID2Q8N945 189 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 C12orf50Q8NA57 414 aaPredicted RBP13.63□□□□□ -0.23
SNX1-211ENST00000560829 EXD1Q8NHP7 514 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 UBA3Q8TBC4 463 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 SLC35F5Q8WV83 523 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■■■■■ 29
SNX1-211ENST00000560829 SEC14L1Q92503 715 aa13.63□□□□□ -0.23
SNX1-211ENST00000560829 SLC4A5Q9BY07 1137 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms