RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 HGSNATQ68CP4 663 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 LRRC49Q8IUZ0 686 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 ZDHHC14Q8IZN3 488 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.78□□□□□ -1.48
ZEB1-219ENST00000560721 PLEKHO2Q8TD55 490 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 ZNF516Q92618 1163 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 FAF2Q96CS3 445 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 MCRS1Q96EZ8 462 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 SH3GL2Q99962 352 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 TUBGCP2Q9BSJ2 902 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 RASSF4Q9H2L5 321 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 ACBD3Q9H3P7 528 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 HIPK3Q9H422 1215 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 STRIP2Q9ULQ0 834 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 FAN1Q9Y2M0 1017 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 RRP15Q9Y3B9 282 aaKnown RBP5.78□□□□□ -1.48
ZEB1-219ENST00000560721 SAR1BQ9Y6B6 198 aa5.78□□□□□ -1.48
ZEB1-219ENST00000560721 SMIM28A0A1B0GU29 152 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 XPO1O14980 1071 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 TNNC2P02585 160 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 TFRCP02786 760 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 C6orf222P0C671 652 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 HOXB8P17481 243 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 SLC1A1P43005 524 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 NOP2P46087 812 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 MYO1EQ12965 1108 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 MAP9Q49MG5 647 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 TIGD5Q53EQ6 642 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 CLLU1OSQ5K130 101 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 SPDYCQ5MJ68 293 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 EMC10Q5UCC4 262 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 TTC39BQ5VTQ0 682 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 C4orf22Q6V702 233 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 C16orf59Q7L2K0 433 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 MMGT1Q8N4V1 131 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 WHAMMQ8TF30 809 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 AENQ8WTP8 325 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 CPLX3Q8WVH0 158 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 WNT8BQ93098 351 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 OTUB2Q96DC9 234 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 RUNDC3BQ96NL0 473 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 MMS19Q96T76 1030 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 HOMER2Q9NSB8 354 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 FBXW11Q9UKB1 542 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 COL5A1P20908 1838 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 ATXN2Q99700 1313 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 A0A087WZ62 844 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 HHLA1C9JL84 531 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 ATP1A1P05023 1023 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 TMEM253P0C7T8 217 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 ODC1P11926 461 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 NR2F2P24468 414 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 SOX5P35711 763 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 LMAN1P49257 510 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 TAF6P49848 677 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 PMS1P54277 932 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 PEX3P56589 373 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 GPR17Q13304 367 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 TRIM60Q495X7 471 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 FKBP15Q5T1M5 1219 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 MPP7Q5T2T1 576 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 PRPF38BQ5VTL8 546 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 KLHL10Q6JEL2 608 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 CCNI2Q6ZMN8 369 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 LEKR1Q6ZMV7 388 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 DDX42Q86XP3 938 aaKnown RBP eCLIP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 CSGALNACT2Q8N6G5 542 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 TMEM40Q8WWA1 233 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 C1orf74Q96LT6 269 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 PPP1R2P1Q96PQ5 205 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 FDXACB1Q9BRP7 624 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 OLA1Q9NTK5 396 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 EPS15L1Q9UBC2 864 aa5.77□□□□□ -1.49
ZEB1-219ENST00000560721 MAGEC2Q9UBF1 373 aaPredicted RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 PPARGC1AQ9UBK2 798 aaKnown RBP5.77□□□□□ -1.49
ZEB1-219ENST00000560721 F8VZ95 297 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 O00370 1275 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 ERLIN2O94905 339 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 RTN3O95197 1032 aaPredicted RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 RHOXF2BP0C7M4 288 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 ZNF286BP0CG31 522 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 ELNP15502 786 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 PCSK1P29120 753 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 EIF2DP41214 584 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 CORO7P57737 925 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 UBXN1Q04323 297 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 CKAP4Q07065 602 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 CUL2Q13617 745 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 PRKG1Q13976 671 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 NFE2Q16621 373 aaPredicted RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 FAM102BQ5T8I3 360 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 PLEKHA7Q6IQ23 1121 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 HERC6Q8IVU3 1022 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 CPXM2Q8N436 756 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 RNF149Q8NC42 400 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 KBTBD7Q8WVZ9 684 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 RHOXF2Q9BQY4 288 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 MSTO1Q9BUK6 570 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms