RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
SYNM-203ENST00000560674 NR3C2P08235 984 aa13.18□□□□□ -0.3
SYNM-203ENST00000560674 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
SYNM-203ENST00000560674 P3H2Q8IVL5 708 aa13.18□□□□□ -0.3
SYNM-203ENST00000560674 DNAJC7Q99615 494 aa13.18□□□□□ -0.3
SYNM-203ENST00000560674 MOV10L1Q9BXT6 1211 aaKnown RBP13.18□□□□□ -0.3
SYNM-203ENST00000560674 SENP2Q9HC62 589 aa13.18□□□□□ -0.3
SYNM-203ENST00000560674 ASMTLO95671 621 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 ALBP02768 609 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 SERPIND1P05546 499 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 RASA1P20936 1047 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 NUDT2P50583 147 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 RPS6P62753 249 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 SKOR1P84550 965 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 EFHC1Q5JVL4 640 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 TTC33Q6PID6 262 aaPredicted RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 SUGP1Q8IWZ8 645 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 MYCBPAPQ8TBZ2 947 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 VPS50Q96JG6 964 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 FAM111AQ96PZ2 611 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 DTNAQ9Y4J8 743 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 MAGEB2O15479 319 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 HMBSP08397 361 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 NQO1P15559 274 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 SERPINB1P30740 379 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 TMED10P49755 219 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 ERVK-24P63145 666 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 SV2CQ496J9 727 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 EPC2Q52LR7 807 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 PTRHD1Q6GMV3 140 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 BBS7Q8IWZ6 715 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 UBA3Q8TBC4 463 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 TBC1D16Q8TBP0 767 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 CNBD2Q96M20 576 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 CD248Q9HCU0 757 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 LSM7Q9UK45 103 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 SETBP1Q9Y6X0 1596 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 PPP3CCP48454 512 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 RCN1Q15293 331 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 EPS8L3Q8TE67 593 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 MAGEB18Q96M61 343 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 FUT8Q9BYC5 575 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 CAAP1Q9H8G2 361 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 ZBTB39O15060 712 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 MAP3K7CLP57077 242 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 OVGP1Q12889 678 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 NFIXQ14938 502 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 KPNB1Q14974 876 aaKnown RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 DCAF6Q58WW2 860 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 CYP4A22Q5TCH4 519 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 H2AFY2Q9P0M6 372 aaPredicted RBP13.17□□□□□ -0.3
SYNM-203ENST00000560674 GSNP06396 782 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 WASHC5Q12768 1159 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 STX5Q13190 355 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 SNX17Q15036 470 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 JMJD4Q9H9V9 463 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 TRPC7Q9HCX4 862 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 OLFML3Q9NRN5 406 aa13.17□□□□□ -0.3
SYNM-203ENST00000560674 ATP6V1B1P15313 513 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 STIP1P31948 543 aaKnown RBP13.16□□□□□ -0.3
SYNM-203ENST00000560674 FDFT1P37268 417 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 TRIM69Q86WT6 500 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 MICU2Q8IYU8 434 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 FRMD8P1Q9BZ68 369 aaPredicted RBP13.16□□□□□ -0.3
SYNM-203ENST00000560674 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
SYNM-203ENST00000560674 MPP6Q9NZW5 540 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 HEY2Q9UBP5 337 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 CHORDC1Q9UHD1 332 aaPredicted RBP13.16□□□□□ -0.3
SYNM-203ENST00000560674 NAGPAQ9UK23 515 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 A0A1B0GW55 424 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 EVPLLA8MZ36 301 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 DUX4L2P0CJ85 424 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 DUX4L3P0CJ86 424 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 DUX4L4P0CJ87 422 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 DUX4L5P0CJ88 424 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 DUX4L6P0CJ89 424 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 DUX4L7P0CJ90 424 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 NLRP9Q7RTR0 991 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 ADCK2Q7Z695 626 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 LINC00523Q86TU6 105 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 TFB1MQ8WVM0 346 aaKnown RBP13.16□□□□□ -0.3
SYNM-203ENST00000560674 ILKAPQ9H0C8 392 aaPredicted RBP13.16□□□□□ -0.3
SYNM-203ENST00000560674 MUC3BQ9H195 1237 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 PRDM5Q9NQX1 630 aaPredicted RBP13.16□□□□□ -0.3
SYNM-203ENST00000560674 DUX4Q9UBX2 424 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 V9GYQ6 96 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 GLRA3O75311 464 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 FAM83EQ2M2I3 478 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 RNF17Q9BXT8 1623 aaKnown RBP13.16□□□□□ -0.3
SYNM-203ENST00000560674 TMEM245Q9H330 911 aa13.16□□□□□ -0.3
SYNM-203ENST00000560674 TMBIM4Q9HC24 238 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms