RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 NLRP12P59046 1061 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 NR1H3Q13133 447 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 ZRSR1Q15695 479 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 SPATA1Q5VX52 437 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 TXNDC8Q6A555 127 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 LRSAM1Q6UWE0 723 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 CD302Q8IX05 232 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 DEFB124Q8NES8 71 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 ECT2Q9H8V3 914 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 DUS2Q9NX74 493 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 MAGED2Q9UNF1 606 aaPredicted RBP19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 ZFYVE26Q68DK2 2539 aa19.27■□□□□ 0.68
TSPAN3-208ENST00000560514 TCHHQ07283 1943 aa19.27■□□□□ 0.67
TSPAN3-208ENST00000560514 SOBPA7XYQ1 873 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 PPEF2O14830 753 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 CYP11A1P05108 521 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 HAPLN1P10915 354 aaPredicted RBP19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 RDXP35241 583 aaKnown RBP19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 RING1Q06587 406 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 LMAN2Q12907 356 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 MTF1Q14872 753 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 C9orf57Q5W0N0 161 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 KIAA1211LQ6NV74 962 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 MON1AQ86VX9 555 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 DCP1BQ8IZD4 617 aaKnown RBP19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 IGSF22Q8N9C0 903 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 PIGKQ92643 395 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 ATP2A3Q93084 1043 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 TPSD1Q9BZJ3 242 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 TBX20Q9UMR3 447 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 SPEGQ15772 3267 aa19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 FASNP49327 2511 aaKnown RBP19.26■□□□□ 0.67
TSPAN3-208ENST00000560514 TSC2P49815 1807 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 ZZEF1O43149 2961 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 MYO16Q9Y6X6 1858 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 PATE3B3GLJ2 98 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 CDX4O14627 284 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 HNRNPDLO14979 420 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 OGTO15294 1046 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 F11P03951 625 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 CSH1P0DML2 217 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 CSH2P0DML3 217 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 IRX4P78413 519 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 ZNF268Q14587 947 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 ENOX2Q16206 610 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 JADE1Q6IE81 842 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 TTC30AQ86WT1 665 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 PYM1Q9BRP8 204 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 NUSAP1Q9BXS6 441 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 HAPLN2Q9GZV7 340 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 LARSQ9P2J5 1176 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 UXTQ9UBK9 157 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 NEUROG3Q9Y4Z2 214 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 PCDHB5Q9Y5E4 795 aa19.25■□□□□ 0.67
TSPAN3-208ENST00000560514 ASCC3Q8N3C0 2202 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 PP2D1A8MPX8 630 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 CYB561D2O14569 222 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 NBR1Q14596 966 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 TMEM132DQ14C87 1099 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 NAIF1Q69YI7 327 aaPredicted RBP19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 ANO7Q6IWH7 933 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 TMEM150AQ86TG1 271 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 C4orf32Q8N8J7 132 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 OSCP1Q8WVF1 389 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 OBSL1O75147 1896 aa19.24■□□□□ 0.67
TSPAN3-208ENST00000560514 KIAA1549LQ6ZVL6 1849 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 PIRO00625 290 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 HYAL3O43820 417 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 PRPF40AO75400 957 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 ALDH1A2O94788 518 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 CDC25AP30304 524 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 TAF6P49848 677 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 TSPY1Q01534 308 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 FAM160A1Q05DH4 1040 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 TRIM61Q5EBN2 209 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 DTHD1Q6ZMT9 781 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 MSTO1Q9BUK6 570 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 TRPC7Q9HCX4 862 aa19.23■□□□□ 0.67
TSPAN3-208ENST00000560514 SCN1AP35498 2009 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 TRAV19A0A0A6YYK7 116 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 LAD1O00515 517 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 MAP3K13O43283 966 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 CKMP06732 381 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 HMGA1P17096 107 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 MAPK8P45983 427 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 SEC13P55735 322 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 C2orf27AQ580R0 203 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 LMBRD2Q68DH5 695 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 LPCAT2Q7L5N7 544 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 KCNK18Q7Z418 384 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 LRRTM3Q86VH5 581 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 CDK5RAP3Q96JB5 506 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 SPACA7Q96KW9 195 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 CNOT6LQ96LI5 555 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 KCND2Q9NZV8 630 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 EVLQ9UI08 416 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 DERAQ9Y315 318 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 MSRB2Q9Y3D2 182 aa19.22■□□□□ 0.67
TSPAN3-208ENST00000560514 WNT6Q9Y6F9 365 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms